RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 ADGRG1Q9Y653 693 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 ARHGEF28Q8N1W1 1705 aaKnown RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 PALLDQ8WX93 1383 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 FRMPD2Q68DX3 1309 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 PRPF3O43395 683 aaKnown RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 TOM1O60784 492 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 FTCDO95954 541 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 NAP1L3Q99457 506 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 SUGCTQ9HAC7 445 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 ZNF804BA4D1E1 1349 aa12.71□□□□□ -0.37
VPS33A-201ENST00000267199 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
VPS33A-201ENST00000267199 FLOT1O75955 427 aa12.71□□□□□ -0.37
VPS33A-201ENST00000267199 RFX5P48382 616 aaPredicted RBP12.71□□□□□ -0.37
VPS33A-201ENST00000267199 SPATS2Q86XZ4 545 aaKnown RBP12.71□□□□□ -0.37
VPS33A-201ENST00000267199 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.37
VPS33A-201ENST00000267199 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
VPS33A-201ENST00000267199 ATP2A1O14983 1001 aa12.71□□□□□ -0.37
VPS33A-201ENST00000267199 VPS41P49754 854 aa12.71□□□□□ -0.37
VPS33A-201ENST00000267199 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
VPS33A-201ENST00000267199 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
VPS33A-201ENST00000267199 RIN2Q8WYP3 895 aaPredicted RBP12.71□□□□□ -0.37
VPS33A-201ENST00000267199 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.71□□□□□ -0.37
VPS33A-201ENST00000267199 UBAP1LF5GYI3 381 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 MYOCDQ8IZQ8 938 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 BPIFA3Q9BQP9 254 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 CTDNEP1O95476 244 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 PRR29P0C7W0 189 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 GTF2IP78347 998 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 TCP10Q12799 353 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 NEDD9Q14511 834 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 PPP4R3AQ6IN85 833 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 HIBCHQ6NVY1 386 aaPredicted RBP12.71□□□□□ -0.38
VPS33A-201ENST00000267199 CCDC63Q8NA47 563 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.38
VPS33A-201ENST00000267199 ERFEQ4G0M1 354 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 TAOK1Q7L7X3 1001 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 NFU1Q9UMS0 254 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 USP17L8P0C7I0 530 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 NR1D1P20393 614 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 PLA2G4AP47712 749 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 ACTN3Q08043 901 aaPredicted RBP12.7□□□□□ -0.38
VPS33A-201ENST00000267199 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
VPS33A-201ENST00000267199 ARHGAP44Q17R89 818 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 ZNF658Q5TYW1 1059 aaPredicted RBP12.7□□□□□ -0.38
VPS33A-201ENST00000267199 OGFOD1Q8N543 542 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 PCDHA12Q9UN75 941 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 DNM3Q9UQ16 869 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 WDR19Q8NEZ3 1342 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 FDPSP14324 419 aaKnown RBP12.7□□□□□ -0.38
VPS33A-201ENST00000267199 USH1GQ495M9 461 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 GALNT17Q6IS24 598 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
VPS33A-201ENST00000267199 EEF1GP26641 437 aaKnown RBP12.69□□□□□ -0.38
VPS33A-201ENST00000267199 SLC8A1P32418 973 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 LLGL1Q15334 1064 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 CCDC38Q502W7 563 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 NHEJ1Q9H9Q4 299 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-201ENST00000267199 FRMD4BQ9Y2L6 1034 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 STX2P32856 288 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 SESN3P58005 492 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 CTNND1O60716 968 aaKnown RBP12.69□□□□□ -0.38
VPS33A-201ENST00000267199 BTDP43251 543 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 ADCY1Q08828 1119 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 KCNB2Q92953 911 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 DYNLL2Q96FJ2 89 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 UTYO14607 1347 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 TECPR2O15040 1411 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 ESYT3A0FGR9 886 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 GSG1L2A8MUP6 293 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 HIP1RO75146 1068 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
VPS33A-201ENST00000267199 ZKSCAN8Q15776 578 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-201ENST00000267199 TSNAXIP1Q2TAA8 658 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 PAF1Q8N7H5 531 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
VPS33A-201ENST00000267199 STK36Q9NRP7 1315 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 N4BP1O75113 896 aaKnown RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 GBP1P32455 592 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 GUCY1A2P33402 732 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
VPS33A-201ENST00000267199 BRINP3Q76B58 766 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 USP37Q86T82 979 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 GPBP1Q86WP2 473 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 TBC1D22AQ8WUA7 517 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 MCUR1Q96AQ8 359 aa12.68□□□□□ -0.38
VPS33A-201ENST00000267199 NT5C3AQ9H0P0 336 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms