RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 COA1Q9GZY4 146 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 MYO1AQ9UBC5 1043 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 CCNE1P24864 410 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 TXKP42681 527 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 CALCRLQ16602 461 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 CNNM4Q6P4Q7 775 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 LRRC47Q8N1G4 583 aaKnown RBP11.54□□□□□ -0.56
LSG1-201ENST00000265245 CDK5RAP3Q96JB5 506 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 FAM53CQ9NYF3 392 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 CDC23Q9UJX2 597 aa11.54□□□□□ -0.56
LSG1-201ENST00000265245 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 F8W031 263 aaPredicted RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 CEP112Q8N8E3 955 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 SLF1Q9BQI6 1058 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 LRWD1Q9UFC0 647 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 UBR3Q6ZT12 1888 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 RNF225M0QZC1 329 aaPredicted RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 CHMP4BP1P59074 171 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 DDR1Q08345 913 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 DPP8Q6V1X1 898 aaPredicted RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 SV2BQ7L1I2 683 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 SP8Q8IXZ3 490 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 LRRC15Q8TF66 581 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 TUBGCP2Q9BSJ2 902 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 ZC3H12CQ9C0D7 883 aaKnown RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 SERPINB13Q9UIV8 391 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 EPN1Q9Y6I3 576 aaPredicted RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 A0A0U1RQJ8 604 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 TTLL1O95922 423 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 PNMA6AP0CW24 399 aaPredicted RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 EIF6P56537 245 aaKnown RBP11.53□□□□□ -0.56
LSG1-201ENST00000265245 GABPAQ06546 454 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 SRGAP1Q7Z6B7 1085 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 ZNF507Q8TCN5 953 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 ATRIPQ8WXE1 791 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 STK17AQ9UEE5 414 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 SWAP70Q9UH65 585 aa11.53□□□□□ -0.56
LSG1-201ENST00000265245 NDUFA10O95299 355 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 AKR1B1P15121 316 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 TRIM21P19474 475 aaKnown RBP11.52□□□□□ -0.56
LSG1-201ENST00000265245 STK4Q13043 487 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 SLC35F6Q8N357 371 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 COA7Q96BR5 231 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 NAPGQ99747 312 aaPredicted RBP11.52□□□□□ -0.56
LSG1-201ENST00000265245 NUP58Q9BVL2 599 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 GPCPD1Q9NPB8 672 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.56
LSG1-201ENST00000265245 FHOD1Q9Y613 1164 aa11.52□□□□□ -0.56
LSG1-201ENST00000265245 B4DLN1 442 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 POLRMTO00411 1230 aaKnown RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 MTIF2P46199 727 aaKnown RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 TUBB4BP68371 445 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 RETREG2Q8NC44 543 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 DNAJC7Q99615 494 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 RNF216Q9NWF9 866 aaPredicted RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 CAPN11Q9UMQ6 739 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 KLRG2A4D1S0 409 aaPredicted RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 ATP8B1O43520 1251 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 ZRANB2O95218 330 aaKnown RBP eCLIP11.52□□□□□ -0.57
LSG1-201ENST00000265245 IPO7O95373 1038 aaKnown RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 SRGNP10124 158 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
LSG1-201ENST00000265245 CNOT6LQ96LI5 555 aaKnown RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 PCMTD1Q96MG8 357 aaPredicted RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 DUSP9Q99956 384 aaKnown RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
LSG1-201ENST00000265245 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 ARFGAP3Q9NP61 516 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 ATP6V0A2Q9Y487 856 aa11.52□□□□□ -0.57
LSG1-201ENST00000265245 HLA-DOAP06340 250 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 SNHG28P0DPA3 235 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 RXRBP28702 533 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 TNNI2P48788 182 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 ANKRD40Q6AI12 368 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 PPP1R18Q6NYC8 613 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 EEF2KMTQ96G04 330 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 MTMR9Q96QG7 549 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 CHP1Q99653 195 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 EPC1Q9H2F5 836 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 USP40Q9NVE5 1235 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 DDX60LQ5H9U9 1706 aaKnown RBP11.51□□□□□ -0.57
LSG1-201ENST00000265245 PNMA6FA0A0J9YX94 578 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 G3V3G9 751 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 FCER1AP12319 257 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 FKBP15Q5T1M5 1219 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 KRT79Q5XKE5 535 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 PARD6BQ9BYG5 372 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 TMX4Q9H1E5 349 aaPredicted RBP11.51□□□□□ -0.57
LSG1-201ENST00000265245 MYO3BQ8WXR4 1341 aa11.51□□□□□ -0.57
LSG1-201ENST00000265245 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
LSG1-201ENST00000265245 FAM43BQ6ZT52 329 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms