RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ZSCAN5CA6NGD5 496 aaPredicted RBP18.46■□□□□ 0.55
ZNF541-201ENST00000263351 SLURP2P0DP57 97 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 TXKP42681 527 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 ENOX2Q16206 610 aaKnown RBP18.46■□□□□ 0.55
ZNF541-201ENST00000263351 FAM71BQ8TC56 605 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 MS4A14Q96JA4 679 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 TMEM47Q9BQJ4 181 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 MYO1AQ9UBC5 1043 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 BUB1O43683 1085 aa18.45■□□□□ 0.54
ZNF541-201ENST00000263351 MEA1Q16626 185 aa18.45■□□□□ 0.54
ZNF541-201ENST00000263351 TSR1Q2NL82 804 aaKnown RBP18.45■□□□□ 0.54
ZNF541-201ENST00000263351 TSPY3P0CV98 308 aa18.45■□□□□ 0.54
ZNF541-201ENST00000263351 TSPY8P0CW00 308 aa18.45■□□□□ 0.54
ZNF541-201ENST00000263351 EEF1GP26641 437 aaKnown RBP18.45■□□□□ 0.54
ZNF541-201ENST00000263351 RNASE9P60153 205 aaKnown RBP18.45■□□□□ 0.54
ZNF541-201ENST00000263351 THAP9Q9H5L6 903 aa18.45■□□□□ 0.54
ZNF541-201ENST00000263351 SCN7AQ01118 1682 aa18.45■□□□□ 0.54
ZNF541-201ENST00000263351 POTEMA6NI47 508 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 DNM2P50570 870 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 NAPAP54920 295 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 EIF6P56537 245 aaKnown RBP18.44■□□□□ 0.54
ZNF541-201ENST00000263351 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
ZNF541-201ENST00000263351 STIM1Q13586 685 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 FAM182BQ5T319 152 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 C12orf60Q5U649 245 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 MMRN2Q9H8L6 949 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 A0A1W2PQC6 194 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 ESYT3A0FGR9 886 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 KIF5BP33176 963 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 EIF4A3P38919 411 aaKnown RBP18.44■□□□□ 0.54
ZNF541-201ENST00000263351 KCNK18Q7Z418 384 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 CREG2Q8IUH2 290 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 RASSF4Q9H2L5 321 aa18.44■□□□□ 0.54
ZNF541-201ENST00000263351 KLRF2D3W0D1 207 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 KRT86O43790 486 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 CALML3P27482 149 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 GFPT1Q06210 699 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 SND1Q7KZF4 910 aaKnown RBP eCLIP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 TSEN2Q8NCE0 465 aaKnown RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 PROCA1Q8NCQ7 364 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 FGFBP2Q9BYJ0 223 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 TBC1D7Q9P0N9 293 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 GRM4Q14833 912 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 CCNI2Q6ZMN8 369 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 CERS3Q8IU89 383 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 AFAP1L1Q8TED9 768 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 NLRC4Q9NPP4 1024 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 ATP8A2Q9NTI2 1148 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 PACSIN2Q9UNF0 486 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-201ENST00000263351 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
ZNF541-201ENST00000263351 MYMKA6NI61 221 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 CCNE1P24864 410 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 KCNB1Q14721 858 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 NFIXQ14938 502 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 SF3B3Q15393 1217 aaKnown RBP18.42■□□□□ 0.54
ZNF541-201ENST00000263351 TRADDQ15628 312 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 SECISBP2LQ93073 1101 aaKnown RBP18.42■□□□□ 0.54
ZNF541-201ENST00000263351 CCDC42Q96M95 316 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 PIGSQ96S52 555 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 MKRN1Q9UHC7 482 aaKnown RBP18.42■□□□□ 0.54
ZNF541-201ENST00000263351 SMCO2A6NFE2 343 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 LRRC53A6NM62 1247 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 SLC37A4O43826 429 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 TDP2O95551 362 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 ZBED6P86452 979 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 RRAGAQ7L523 313 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 COA7Q96BR5 231 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 CRACR2AQ9BSW2 395 aa18.42■□□□□ 0.54
ZNF541-201ENST00000263351 IFIH1Q9BYX4 1025 aaKnown RBP18.42■□□□□ 0.54
ZNF541-201ENST00000263351 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 CYLC1P35663 651 aaPredicted RBP18.41■□□□□ 0.54
ZNF541-201ENST00000263351 NUTM2BA6NNL0 878 aaPredicted RBP18.41■□□□□ 0.54
ZNF541-201ENST00000263351 NUTM2EB1AL46 878 aaPredicted RBP18.41■□□□□ 0.54
ZNF541-201ENST00000263351 EIF3CLB5ME19 914 aaKnown RBP18.41■□□□□ 0.54
ZNF541-201ENST00000263351 KIF11P52732 1056 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 KRT83P78385 493 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 TUBB2AQ13885 445 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 MTMR8Q96EF0 704 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 EIF3CQ99613 913 aaKnown RBP18.41■□□□□ 0.54
ZNF541-201ENST00000263351 TUBB2BQ9BVA1 445 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 CCSER1Q9C0I3 900 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 GBP3Q9H0R5 595 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 ZNHIT6Q9NWK9 470 aaKnown RBP18.41■□□□□ 0.54
ZNF541-201ENST00000263351 PCDHA13Q9Y5I0 950 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 CASZ1Q86V15 1759 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 MYH1P12882 1939 aa18.41■□□□□ 0.54
ZNF541-201ENST00000263351 EDIL3O43854 480 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 RASA1P20936 1047 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 RASSF7Q02833 373 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 ARID5AQ03989 594 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 KIF5AQ12840 1032 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 ECM1Q16610 540 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 PACS2Q86VP3 889 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 SH2D3CQ8N5H7 860 aa18.4■□□□□ 0.54
ZNF541-201ENST00000263351 BLOC1S4Q9NUP1 217 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms