RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
SMG6-201ENST00000263073 KLHL29Q96CT2 875 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 NHEJ1Q9H9Q4 299 aaPredicted RBP13.17□□□□□ -0.3
SMG6-201ENST00000263073 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 PDE6AP16499 860 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 CASP1P29466 404 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 EPHB4P54760 987 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 ITKQ08881 620 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 MMS19Q96T76 1030 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 CYTH2Q99418 400 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 PSTPIP2Q9H939 334 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 PDCLQ13371 301 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 TERF2Q15554 542 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 METTL13Q8N6R0 699 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 MARCH10Q8NA82 808 aaPredicted RBP13.17□□□□□ -0.3
SMG6-201ENST00000263073 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 GRK7Q8WTQ7 553 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 SPATS2Q86XZ4 545 aaKnown RBP13.17□□□□□ -0.3
SMG6-201ENST00000263073 MCUQ8NE86 351 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 MEIS1O00470 390 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 GSTA1P08263 222 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 GSTA2P09210 222 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 KCNA6P17658 529 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 LCA5Q86VQ0 697 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 ANKFY1Q9P2R3 1169 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 CCDC93Q567U6 631 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 KLRF2D3W0D1 207 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 JADE1Q6IE81 842 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 NME8Q8N427 588 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 MAIP1Q8WWC4 291 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 NT5C3AQ9H0P0 336 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 PRAMEF22A3QJZ6 481 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 H0Y3Z8 333 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 YARSP54577 528 aaKnown RBP13.16□□□□□ -0.3
SMG6-201ENST00000263073 IRX4P78413 519 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 TRAPPC3LQ5T215 181 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 IL17REQ8NFR9 667 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 A0A087WUV0 522 aaPredicted RBP13.16□□□□□ -0.3
SMG6-201ENST00000263073 MYO1CO00159 1063 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 LUC7L3O95232 432 aaKnown RBP13.16□□□□□ -0.3
SMG6-201ENST00000263073 SCNN1DP51172 638 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 ACTN3Q08043 901 aaPredicted RBP13.16□□□□□ -0.3
SMG6-201ENST00000263073 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 SLC4A7Q9Y6M7 1214 aa13.16□□□□□ -0.3
SMG6-201ENST00000263073 GFPT2O94808 682 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
SMG6-201ENST00000263073 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMG6-201ENST00000263073 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
SMG6-201ENST00000263073 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 ORAI2Q96SN7 254 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 IL9RQ01113 521 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 SESTD1Q86VW0 696 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 TRIML1Q8N9V2 468 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 PPME1Q9Y570 386 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 H7C0C1 242 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 NR1D1P20393 614 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 ATP5OP48047 213 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 FAM178BQ8IXR5 827 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
SMG6-201ENST00000263073 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.15□□□□□ -0.3
SMG6-201ENST00000263073 SART1O43290 800 aaKnown RBP13.15□□□□□ -0.3
SMG6-201ENST00000263073 CTSWP56202 376 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 NACA2Q9H009 215 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 DBNLQ9UJU6 430 aaKnown RBP13.15□□□□□ -0.3
SMG6-201ENST00000263073 PZPP20742 1482 aa13.15□□□□□ -0.3
SMG6-201ENST00000263073 MROH5Q6ZUA9 1318 aa13.15□□□□□ -0.31
SMG6-201ENST00000263073 MYL7Q01449 175 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 CUL4BQ13620 913 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 SLC12A1Q13621 1099 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 XKR9Q5GH70 373 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 FAM26FQ5R3K3 315 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 POMGNT1Q8WZA1 660 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 ZNF408Q9H9D4 720 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 DAAM1Q9Y4D1 1078 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 LIG4P49917 911 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 RFX6Q8HWS3 928 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMG6-201ENST00000263073 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms