RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 ARMCX5Q6P1M9 558 aa15.89■□□□□ 0.14
TBC1D1-201ENST00000261439 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.89■□□□□ 0.14
TBC1D1-201ENST00000261439 COL4A3BPQ9Y5P4 624 aa15.89■□□□□ 0.14
TBC1D1-201ENST00000261439 M0R2C6 588 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 DDAH1O94760 285 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 PNMA6AP0CW24 399 aaPredicted RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 TTBK2Q6IQ55 1244 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 OTUD6AQ7L8S5 288 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 N4BP1O75113 896 aaKnown RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 EEF1GP26641 437 aaKnown RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 ARHGAP4P98171 946 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 DHX9Q08211 1270 aaKnown RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 XKR9Q5GH70 373 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 SLFN12Q8IYM2 578 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 RNF168Q8IYW5 571 aaPredicted RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 KLHL29Q96CT2 875 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 FOXP1Q9H334 677 aaPredicted RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 OSBPL3Q9H4L5 887 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 ATP1A3P13637 1013 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 PRKG1Q13976 671 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 TRMT2AQ8IZ69 625 aaKnown RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 P2RX5Q93086 422 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 PUS3Q9BZE2 481 aaKnown RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 TRIM50Q86XT4 487 aa15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 TSPYL2Q9H2G4 693 aaPredicted RBP15.89■□□□□ 0.13
TBC1D1-201ENST00000261439 SPECC1L-ADORA2AF8WAN1 911 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 SART1O43290 800 aaKnown RBP15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 CDC25AP30304 524 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 YWHAEP62258 255 aaKnown RBP15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 MRPS25P82663 173 aaKnown RBP15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 CYP4F22Q6NT55 531 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 BBOF1Q8ND07 529 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 RUNDC3BQ96NL0 473 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 JRKLQ9Y4A0 524 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 MX2P20592 715 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 NR2F2P24468 414 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 NSFP46459 744 aaKnown RBP15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 GTF2IP78347 998 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 TCP11X2Q5H9J9 407 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 MFSD14BQ5SR56 506 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 ZMYM1Q5SVZ6 1142 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 FMNL1O95466 1100 aaPredicted RBP15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 NR5A1Q13285 461 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 SETSIPP0DME0 302 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 PHKA1P46020 1223 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 MYL7Q01449 175 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 CYP27A1Q02318 531 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 NACA2Q9H009 215 aa15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 NOVA2Q9UNW9 492 aaKnown RBP15.88■□□□□ 0.13
TBC1D1-201ENST00000261439 P4HA1P13674 534 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 TMED2Q15363 201 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 GLG1Q92896 1179 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 NHEJ1Q9H9Q4 299 aaPredicted RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 TBK1Q9UHD2 729 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 PGRMC1O00264 195 aaKnown RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 RPS8P62241 208 aaKnown RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 FAM133AQ8N9E0 248 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 RIOK1Q9BRS2 568 aaKnown RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 SPATS2LQ9NUQ6 558 aaKnown RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 LMNB1P20700 586 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 GALNT17Q6IS24 598 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 SGK1O00141 431 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 GSTA1P08263 222 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 INHBAP08476 426 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 GSTA2P09210 222 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 ZNF658Q5TYW1 1059 aaPredicted RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 DHTKD1Q96HY7 919 aaPredicted RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 MMS19Q96T76 1030 aa15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 BZW2Q9Y6E2 419 aaKnown RBP15.87■□□□□ 0.13
TBC1D1-201ENST00000261439 ERBB4Q15303 1308 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 H7C0C1 242 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 EIF4A3P38919 411 aaKnown RBP15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 ATP5OP48047 213 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 PABPC4Q13310 644 aaKnown RBP eCLIP15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 PROSER3Q2NL68 480 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 MMEL1Q495T6 779 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 SPDL1Q96EA4 605 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 NOD1Q9Y239 953 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 MYO1FO00160 1098 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 PFDN1O60925 122 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 CUL4BQ13620 913 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 DCLK2Q8N568 766 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 METTL13Q8N6R0 699 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 PDZD8Q8NEN9 1154 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 GDAP1Q8TB36 358 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 LARSQ9P2J5 1176 aaKnown RBP15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 SHANK2Q9UPX8 1470 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 LRRN2O75325 713 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 NDUFA10O95299 355 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 NR1D1P20393 614 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 PPP2R5AQ15172 486 aa15.86■□□□□ 0.13
TBC1D1-201ENST00000261439 TERF2Q15554 542 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms