RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 NFRKBQ6P4R8 1299 aa15.04■□□□□ -0
VHL-201ENST00000256474 PYM1Q9BRP8 204 aaKnown RBP15.04■□□□□ -0
VHL-201ENST00000256474 TRAF5O00463 557 aa15.04■□□□□ -0
VHL-201ENST00000256474 EIF4A3P38919 411 aaKnown RBP15.04■□□□□ -0
VHL-201ENST00000256474 EPS15P42566 896 aa15.04■□□□□ -0
VHL-201ENST00000256474 GNAQP50148 359 aa15.04■□□□□ -0
VHL-201ENST00000256474 IKQ13123 557 aaPredicted RBP15.04■□□□□ -0
VHL-201ENST00000256474 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.04■□□□□ -0
VHL-201ENST00000256474 SV2BQ7L1I2 683 aa15.04■□□□□ -0
VHL-201ENST00000256474 HDAC7Q8WUI4 952 aa15.04■□□□□ -0
VHL-201ENST00000256474 CEP95Q96GE4 821 aa15.04■□□□□ -0
VHL-201ENST00000256474 NGLY1Q96IV0 654 aa15.04■□□□□ -0
VHL-201ENST00000256474 TRIM9Q9C026 710 aa15.04■□□□□ -0
VHL-201ENST00000256474 SLIT2O94813 1529 aa15.04■□□□□ -0
VHL-201ENST00000256474 STXBP3O00186 592 aa15.04■□□□□ -0
VHL-201ENST00000256474 PDE2AO00408 941 aaPredicted RBP15.04■□□□□ -0
VHL-201ENST00000256474 MYBL2P10244 700 aa15.04■□□□□ -0
VHL-201ENST00000256474 CALCRLQ16602 461 aa15.04■□□□□ -0
VHL-201ENST00000256474 SPTY2D1Q68D10 685 aaPredicted RBP15.04■□□□□ -0
VHL-201ENST00000256474 NEK8Q86SG6 692 aa15.04■□□□□ -0
VHL-201ENST00000256474 REXO1Q8N1G1 1221 aaKnown RBP15.04■□□□□ -0
VHL-201ENST00000256474 NOC3LQ8WTT2 800 aaKnown RBP15.04■□□□□ -0
VHL-201ENST00000256474 PACSIN2Q9UNF0 486 aaPredicted RBP15.04■□□□□ -0
VHL-201ENST00000256474 LMTK3Q96Q04 1460 aa15.04■□□□□ -0
VHL-201ENST00000256474 MYH7P12883 1935 aa15.04■□□□□ -0
VHL-201ENST00000256474 USO1O60763 962 aaKnown RBP15.03■□□□□ -0
VHL-201ENST00000256474 ARL6IP4Q66PJ3 421 aaKnown RBP15.03■□□□□ -0
VHL-201ENST00000256474 COG1Q8WTW3 980 aa15.03■□□□□ -0
VHL-201ENST00000256474 DUSP9Q99956 384 aaKnown RBP15.03■□□□□ -0
VHL-201ENST00000256474 MTA3Q9BTC8 594 aa15.03■□□□□ -0
VHL-201ENST00000256474 TAF1P21675 1872 aa15.03■□□□□ -0
VHL-201ENST00000256474 ESYT3A0FGR9 886 aa15.03■□□□□ -0
VHL-201ENST00000256474 ATP8B1O43520 1251 aa15.03■□□□□ -0
VHL-201ENST00000256474 TTI2Q6NXR4 508 aa15.03■□□□□ -0
VHL-201ENST00000256474 C4orf32Q8N8J7 132 aa15.03■□□□□ -0
VHL-201ENST00000256474 RUFY1Q96T51 708 aa15.03■□□□□ -0
VHL-201ENST00000256474 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
VHL-201ENST00000256474 CAPN6Q9Y6Q1 641 aa15.03■□□□□ -0
VHL-201ENST00000256474 FAM196BA6NMK8 535 aa15.03■□□□□ -0
VHL-201ENST00000256474 CCNE1P24864 410 aa15.03■□□□□ -0
VHL-201ENST00000256474 SF3B3Q15393 1217 aaKnown RBP15.03■□□□□ -0
VHL-201ENST00000256474 KCTD16Q68DU8 428 aa15.03■□□□□ -0
VHL-201ENST00000256474 ANKRD2Q9GZV1 360 aa15.03■□□□□ -0
VHL-201ENST00000256474 BARHL2Q9NY43 387 aa15.03■□□□□ -0
VHL-201ENST00000256474 PLEKHG2Q9H7P9 1386 aa15.03■□□□□ -0
VHL-201ENST00000256474 EEF1GP26641 437 aaKnown RBP15.02■□□□□ -0
VHL-201ENST00000256474 GGCXP38435 758 aa15.02■□□□□ -0
VHL-201ENST00000256474 MAGEA1P43355 309 aa15.02■□□□□ -0
VHL-201ENST00000256474 CDK8P49336 464 aa15.02■□□□□ -0
VHL-201ENST00000256474 SNAP25P60880 206 aa15.02■□□□□ -0
VHL-201ENST00000256474 GFPT1Q06210 699 aaPredicted RBP15.02■□□□□ -0
VHL-201ENST00000256474 AMIGO3Q86WK7 504 aa15.02■□□□□ -0
VHL-201ENST00000256474 RPGRQ92834 1020 aaKnown RBP15.02■□□□□ -0
VHL-201ENST00000256474 MS4A14Q96JA4 679 aa15.02■□□□□ -0
VHL-201ENST00000256474 NUDT12Q9BQG2 462 aa15.02■□□□□ -0
VHL-201ENST00000256474 FAM107BQ9H098 131 aa15.02■□□□□ -0
VHL-201ENST00000256474 CCNL1Q9UK58 526 aaPredicted RBP15.02■□□□□ -0
VHL-201ENST00000256474 CAPN11Q9UMQ6 739 aa15.02■□□□□ -0
VHL-201ENST00000256474 RTCBQ9Y3I0 505 aaKnown RBP15.02■□□□□ -0
VHL-201ENST00000256474 ITIH6Q6UXX5 1313 aa15.02■□□□□ -0
VHL-201ENST00000256474 G3V3G9 751 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 KLRC4O43908 158 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 ACTN2P35609 894 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 MFSD14BQ5SR56 506 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 DCAF8Q5TAQ9 597 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 MYH8P13535 1937 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 BICDL2A1A5D9 508 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 TACC1O75410 805 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 SCNN1DP51172 638 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 AMPD3Q01432 767 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 DGKHQ86XP1 1220 aa15.02□□□□□ -0.01
VHL-201ENST00000256474 LRRC53A6NM62 1247 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 GRM4Q14833 912 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 GIMAP8Q8ND71 665 aaPredicted RBP15.01□□□□□ -0.01
VHL-201ENST00000256474 PARP4Q9UKK3 1724 aaKnown RBP15.01□□□□□ -0.01
VHL-201ENST00000256474 FTCDO95954 541 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 GNA11P29992 359 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 USP14P54578 494 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 RAPGEF1Q13905 1077 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 TCERG1LQ5VWI1 586 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 KCTD1Q719H9 257 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 AFAP1L1Q8TED9 768 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 EXOC4Q96A65 974 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 ZNF142P52746 1687 aaPredicted RBP15.01□□□□□ -0.01
VHL-201ENST00000256474 MAP2K7O14733 419 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 RASA1P20936 1047 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 GUCY2FP51841 1108 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 SF3A3Q12874 501 aaKnown RBP eCLIP15.01□□□□□ -0.013e-11■■■■■ 32.8
VHL-201ENST00000256474 TMEM266Q2M3C6 531 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 MAP9Q49MG5 647 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 DPP8Q6V1X1 898 aaPredicted RBP15.01□□□□□ -0.01
VHL-201ENST00000256474 LRRC1Q9BTT6 524 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 MXD3Q9BW11 206 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 EHD4Q9H223 541 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 THAP9Q9H5L6 903 aa15.01□□□□□ -0.01
VHL-201ENST00000256474 NPHP3-ACAD11A0A0J9YXS1 232 aa15□□□□□ -0.01
VHL-201ENST00000256474 MYMKA6NI61 221 aa15□□□□□ -0.01
VHL-201ENST00000256474 LRRC10BA6NIK2 292 aa15□□□□□ -0.01
VHL-201ENST00000256474 MYO1CO00159 1063 aa15□□□□□ -0.01
VHL-201ENST00000256474 SLC37A4O43826 429 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms