RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 KIF5BP33176 963 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 USP8P40818 1118 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 TRAPPC10P48553 1259 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 MSL3Q8N5Y2 521 aaKnown RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 TGFBRAP1Q8WUH2 860 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 PARD6BQ9BYG5 372 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 KIF9Q9HAQ2 790 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ABHD10Q9NUJ1 306 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 MKRN1Q9UHC7 482 aaKnown RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 PCDHA6Q9UN73 950 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 PCDHA8Q9Y5H6 950 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 CCDC88AQ3V6T2 1871 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 PPFIA2O75334 1257 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 IVLP07476 585 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 HHATQ5VTY9 493 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 ANKRD2Q9GZV1 360 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 DISC1Q9NRI5 854 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 CHCHD3Q9NX63 227 aaKnown RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 LIMA1Q9UHB6 759 aaKnown RBP12.61□□□□□ -0.39
PDE6B-201ENST00000255622 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
PDE6B-201ENST00000255622 IRS2Q9Y4H2 1338 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 ZPR1O75312 459 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 TSPY3P0CV98 308 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 TSPY8P0CW00 308 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 ERCC3P19447 782 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 CNGA4Q8IV77 575 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 MAPKAPK5Q8IW41 473 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 M0R2N6 131 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 TBC1D8O95759 1140 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 NAT1P18440 290 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 LIG3P49916 1009 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 UBXN1Q04323 297 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
PDE6B-201ENST00000255622 NAA15Q9BXJ9 866 aaKnown RBP12.6□□□□□ -0.39
PDE6B-201ENST00000255622 NYXQ9GZU5 481 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 TFR2Q9UP52 801 aa12.6□□□□□ -0.39
PDE6B-201ENST00000255622 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
PDE6B-201ENST00000255622 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
PDE6B-201ENST00000255622 CALML3P27482 149 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 LONP1P36776 959 aaKnown RBP12.59□□□□□ -0.39
PDE6B-201ENST00000255622 SLC35F6Q8N357 371 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 CHP1Q99653 195 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 SLF1Q9BQI6 1058 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 TRIM10Q9UDY6 481 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 RBM47A0AV96 593 aaKnown RBP12.59□□□□□ -0.39
PDE6B-201ENST00000255622 KIF5CO60282 957 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 RPS6KA3P51812 740 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 DTHD1Q6ZMT9 781 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 EXOC8Q8IYI6 725 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 MAST2Q6P0Q8 1798 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 PDS5AQ29RF7 1337 aaKnown RBP12.59□□□□□ -0.39
PDE6B-201ENST00000255622 ITIH6Q6UXX5 1313 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 TXLNAP40222 546 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 GRM4Q14833 912 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 TBC1D25Q3MII6 688 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 FBXW10Q5XX13 1052 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 ARL6IP4Q66PJ3 421 aaKnown RBP12.59□□□□□ -0.39
PDE6B-201ENST00000255622 LRRC31Q6UY01 552 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
PDE6B-201ENST00000255622 GOLGA1Q92805 767 aa12.59□□□□□ -0.39
PDE6B-201ENST00000255622 LRRC10BA6NIK2 292 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 STXBP3O00186 592 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 HNRNPH1P31943 449 aaKnown RBP12.58□□□□□ -0.4
PDE6B-201ENST00000255622 KRT9P35527 623 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 CHMP4BP1P59074 171 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 NEDD9Q14511 834 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 TADA2BQ86TJ2 420 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 DGKHQ86XP1 1220 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 YIPF2Q9BWQ6 316 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 SBF2Q86WG5 1849 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 PARP1P09874 1014 aaKnown RBP12.58□□□□□ -0.4
PDE6B-201ENST00000255622 RANBP1P43487 201 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 CORO7P57737 925 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 PIP4K2BP78356 416 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 KIF4BQ2VIQ3 1234 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 ADSSL1Q8N142 457 aa12.58□□□□□ -0.4
PDE6B-201ENST00000255622 ENO4A6NNW6 628 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 ARHGAP25P42331 645 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
PDE6B-201ENST00000255622 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDE6B-201ENST00000255622 KLRC4O43908 158 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 ERLIN2O94905 339 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 UBA7P41226 1012 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
PDE6B-201ENST00000255622 BARHL2Q9NY43 387 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms