RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PRPHP41219 470 aa21.39■■□□□ 1.02
TRIM47-201ENST00000254816 AFMP43652 599 aa21.39■■□□□ 1.02
TRIM47-201ENST00000254816 ZRSR1Q15695 479 aaKnown RBP21.39■■□□□ 1.02
TRIM47-201ENST00000254816 DCPSQ96C86 337 aaKnown RBP21.39■■□□□ 1.02
TRIM47-201ENST00000254816 TUBE1Q9UJT0 475 aa21.39■■□□□ 1.02
TRIM47-201ENST00000254816 TECP42680 631 aa21.39■■□□□ 1.01
TRIM47-201ENST00000254816 KARSQ15046 597 aaKnown RBP21.39■■□□□ 1.01
TRIM47-201ENST00000254816 SUPT20HL1Q3ZLR7 823 aa21.39■■□□□ 1.01
TRIM47-201ENST00000254816 DPY19L2Q6NUT2 758 aa21.39■■□□□ 1.01
TRIM47-201ENST00000254816 TBC1D5Q92609 795 aa21.39■■□□□ 1.01
TRIM47-201ENST00000254816 LPAR1Q92633 364 aa21.39■■□□□ 1.01
TRIM47-201ENST00000254816 TANGO6Q9C0B7 1094 aa21.39■■□□□ 1.01
TRIM47-201ENST00000254816 ZHX2Q9Y6X8 837 aa21.39■■□□□ 1.01
TRIM47-201ENST00000254816 CASP1P29466 404 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 TXKP42681 527 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 NLRP12P59046 1061 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 CALCRLQ16602 461 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 STAMQ92783 540 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 OTOFQ9HC10 1997 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 VCAM1P19320 739 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 MTMR9Q96QG7 549 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 UIMC1Q96RL1 719 aa21.38■■□□□ 1.01
TRIM47-201ENST00000254816 USP2O75604 605 aaPredicted RBP21.37■■□□□ 1.01
TRIM47-201ENST00000254816 SLFN14P0C7P3 912 aa21.37■■□□□ 1.01
TRIM47-201ENST00000254816 IQCB1Q15051 598 aa21.37■■□□□ 1.01
TRIM47-201ENST00000254816 E2F4Q16254 413 aa21.37■■□□□ 1.01
TRIM47-201ENST00000254816 SULF1Q8IWU6 871 aa21.37■■□□□ 1.01
TRIM47-201ENST00000254816 ELOA2Q8IYF1 753 aaPredicted RBP21.37■■□□□ 1.01
TRIM47-201ENST00000254816 ZNF280CQ8ND82 737 aa21.37■■□□□ 1.01
TRIM47-201ENST00000254816 GJA10Q969M2 543 aa21.37■■□□□ 1.01
TRIM47-201ENST00000254816 DDX25Q9UHL0 483 aaKnown RBP21.37■■□□□ 1.01
TRIM47-201ENST00000254816 R3HCC1Q9Y3T6 440 aaKnown RBP21.37■■□□□ 1.01
TRIM47-201ENST00000254816 CEP57L1Q8IYX8 460 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 SPC24Q8NBT2 197 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 PAGE5Q96GU1 130 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 AGBL1Q96MI9 1066 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 PLIN2Q99541 437 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 SLF1Q9BQI6 1058 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 WDR18Q9BV38 432 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 RPAP3Q9H6T3 665 aaPredicted RBP21.36■■□□□ 1.01
TRIM47-201ENST00000254816 HOOK1Q9UJC3 728 aaKnown RBP21.36■■□□□ 1.01
TRIM47-201ENST00000254816 COL11A1P12107 1806 aaPredicted RBP21.36■■□□□ 1.01
TRIM47-201ENST00000254816 CFBP00751 764 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 BACE1P56817 501 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 AP3B2Q13367 1082 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 ORC2Q13416 577 aaPredicted RBP21.36■■□□□ 1.01
TRIM47-201ENST00000254816 PPP4R3AQ6IN85 833 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 LDHDQ86WU2 507 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 AS3MTQ9HBK9 375 aa21.36■■□□□ 1.01
TRIM47-201ENST00000254816 FLOT1O75955 427 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 TXLNAP40222 546 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 KANK3Q6NY19 840 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 FCHSD1Q86WN1 690 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 PRPF38AQ8NAV1 312 aaKnown RBP21.35■■□□□ 1.01
TRIM47-201ENST00000254816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.35■■□□□ 1.012e-6■■□□□ 12.8
TRIM47-201ENST00000254816 WDR90Q96KV7 1748 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 SPDYE3A6NKU9 549 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 UBA7P41226 1012 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 USP14P54578 494 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 HMGCS2P54868 508 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 DHX40Q8IX18 779 aaKnown RBP21.35■■□□□ 1.01
TRIM47-201ENST00000254816 C17orf53Q8N3J3 647 aaPredicted RBP21.35■■□□□ 1.01
TRIM47-201ENST00000254816 IQUBQ8NA54 791 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 RASSF8Q8NHQ8 419 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 ZNF536O15090 1300 aa21.35■■□□□ 1.01
TRIM47-201ENST00000254816 CAVIN2O95810 425 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 EPHX2P34913 555 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 PDXDC2PQ6P474 469 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 KRT26Q7Z3Y9 468 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 SH3RF1Q7Z6J0 888 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 L3MBTL3Q96JM7 780 aaPredicted RBP21.34■■□□□ 1.01
TRIM47-201ENST00000254816 DISC1Q9NRI5 854 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 MAN1B1Q9UKM7 699 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 RLFQ13129 1914 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 ARHGAP4P98171 946 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 CPXCR1Q8N123 301 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 AOPEPQ8N6M6 819 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 SMARCE1Q969G3 411 aa21.34■■□□□ 1.01
TRIM47-201ENST00000254816 PAPPA2Q9BXP8 1791 aa21.33■■□□□ 1.01
TRIM47-201ENST00000254816 BMP6P22004 513 aa21.33■■□□□ 1.01
TRIM47-201ENST00000254816 CABP7Q86V35 215 aa21.33■■□□□ 1.01
TRIM47-201ENST00000254816 HAS1Q92839 578 aa21.33■■□□□ 1.01
TRIM47-201ENST00000254816 CCSER1Q9C0I3 900 aa21.33■■□□□ 1.01
TRIM47-201ENST00000254816 CCPG1Q9ULG6 757 aa21.33■■□□□ 1.01
TRIM47-201ENST00000254816 STAT6P42226 847 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 SARSP49591 514 aaKnown RBP21.32■■□□□ 1
TRIM47-201ENST00000254816 USP11P51784 963 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 TRAF1Q13077 416 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.32■■□□□ 1
TRIM47-201ENST00000254816 IGSF22Q8N9C0 903 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 LRRC15Q8TF66 581 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 CRYGNQ8WXF5 182 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 MTRQ99707 1265 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 BLZF1Q9H2G9 400 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 RAVER2Q9HCJ3 691 aaKnown RBP21.32■■□□□ 1
TRIM47-201ENST00000254816 MRPL11Q9Y3B7 192 aaKnown RBP21.32■■□□□ 1
TRIM47-201ENST00000254816 PTPRFP10586 1907 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 POTEMA6NI47 508 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 PIK3CDO00329 1044 aa21.32■■□□□ 1
TRIM47-201ENST00000254816 ICAM1P05362 532 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms