RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 KCNJ12Q14500 433 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 PPFIBP1Q86W92 1011 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 JDP2Q8WYK2 163 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 GMLQ99445 158 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 CCDC94Q9BW85 323 aaPredicted RBP21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 FAM198AQ9UFP1 575 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 LIMA1Q9UHB6 759 aaKnown RBP21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 N4BP3O15049 544 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 EDIL3O43854 480 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 GYPCP04921 128 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 CXCL9Q07325 125 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 ZNF543Q08ER8 600 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 TCP11X2Q5H9J9 407 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 ADGRF4Q8IZF3 695 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 OGFOD1Q8N543 542 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 MMTAG2Q9BU76 263 aaKnown RBP21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 IDI2Q9BXS1 227 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 JMJD4Q9H9V9 463 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 ESYT2A0FGR8 921 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 SLC37A4O43826 429 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 TDP2O95551 362 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 HLA-DOAP06340 250 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 TXKP42681 527 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 FXR1P51114 621 aaKnown RBP eCLIP21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 ADCY7P51828 1080 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 ELF2Q15723 593 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 UBE2SQ16763 222 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 KCTD1Q719H9 257 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 ZSCAN29Q8IWY8 852 aaPredicted RBP21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 DNAJC18Q9H819 358 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 MYH8P13535 1937 aa21.02■□□□□ 0.96
PDLIM4-201ENST00000253754 MFAP3LO75121 409 aa21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 COPB1P53618 953 aaKnown RBP21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 RAD9BQ6WBX8 426 aa21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 IRF2BP1Q8IU81 584 aa21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 ERO1AQ96HE7 468 aa21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 PANX2Q96RD6 677 aa21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 SWAP70Q9UH65 585 aa21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 PHLPP2Q6ZVD8 1323 aa21.02■□□□□ 0.95
PDLIM4-201ENST00000253754 A0A0U1RQJ8 604 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 RNF225M0QZC1 329 aaPredicted RBP21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 CCDC96Q2M329 555 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 ATRIPQ8WXE1 791 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 EEF2KMTQ96G04 330 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 AK8Q96MA6 479 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 HDAC9Q9UKV0 1011 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 DDTLA6NHG4 134 aaPredicted RBP21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 KCNB1Q14721 858 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 WDR24Q96S15 920 aa21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 MRPL44Q9H9J2 332 aaKnown RBP21.01■□□□□ 0.95
PDLIM4-201ENST00000253754 LRRC10BA6NIK2 292 aa21■□□□□ 0.95
PDLIM4-201ENST00000253754 RAD21O60216 631 aa21■□□□□ 0.95
PDLIM4-201ENST00000253754 RHOBTB3O94955 611 aa21■□□□□ 0.95
PDLIM4-201ENST00000253754 SPDYE2BA6NHP3 402 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 USP17L10C9JJH3 530 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 SPDYE6P0CI01 402 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 TNNI2P48788 182 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 DLGAP5Q15398 846 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 GIMAP8Q8ND71 665 aaPredicted RBP20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 MTMR9Q96QG7 549 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 TRIM9Q9C026 710 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 DHX36Q9H2U1 1008 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 SOCS7O14512 581 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 RASSF7Q02833 373 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 CALCRLQ16602 461 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 SH3BP5LQ7L8J4 393 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 HPS3Q969F9 1004 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 SYT17Q9BSW7 474 aa20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.99■□□□□ 0.95
PDLIM4-201ENST00000253754 PNMA6FA0A0J9YX94 578 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 hCG_1984214I3L0E3 225 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 TUBB4AP04350 444 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 SPAG1Q07617 926 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 CIAPIN1Q6FI81 312 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 ZNF713Q8N859 430 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 AGBL3Q8NEM8 1001 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 GJA10Q969M2 543 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 ITIH6Q6UXX5 1313 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 CLRN2A0PK11 232 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 URI1O94763 535 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 FCER1AP12319 257 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 GNG11P61952 73 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 ASIC1P78348 528 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 STK4Q13043 487 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 TRIM47Q96LD4 638 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 IRX2Q9BZI1 471 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 PI4KBQ9UBF8 816 aa20.98■□□□□ 0.95
PDLIM4-201ENST00000253754 POTEMA6NI47 508 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 SPDYE4A6NLX3 237 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 H7C1D1 291 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 MYL1P05976 194 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 PDE4DQ08499 809 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 SRRTQ9BXP5 876 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 EHD4Q9H223 541 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 NPM3O75607 178 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 UBXN1Q04323 297 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 GRB10Q13322 594 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 ERCC6LQ2NKX8 1250 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 ANKRD20A12PQ8NF67 263 aa20.97■□□□□ 0.95
PDLIM4-201ENST00000253754 CUEDC2Q9H467 287 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms