RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 WNT7AO00755 349 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 GNAT1P11488 350 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 KCNJ2P63252 427 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 RTN1Q16799 776 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 EARS2Q5JPH6 523 aaKnown RBP20.2■□□□□ 0.82
PTPN12-201ENST00000248594 ANKLE2Q86XL3 938 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 MGARPQ8TDB4 240 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 CCDC47Q96A33 483 aaKnown RBP20.2■□□□□ 0.82
PTPN12-201ENST00000248594 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.2■□□□□ 0.82
PTPN12-201ENST00000248594 DPH5Q9H2P9 285 aa20.2■□□□□ 0.82
PTPN12-201ENST00000248594 BAZ2BQ9UIF8 2168 aaKnown RBP20.19■□□□□ 0.82
PTPN12-201ENST00000248594 ZNF263O14978 683 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 MXRA7P84157 204 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 TAF11Q15544 211 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 NBPF9Q3BBW0 867 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 CCDC197Q8NCU1 140 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 ZNF570Q96NI8 536 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 TSC22D3Q99576 134 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 AP1M1Q9BXS5 423 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 TANGO6Q9C0B7 1094 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 NOP53Q9NZM5 478 aaKnown RBP20.19■□□□□ 0.82
PTPN12-201ENST00000248594 FAM237AA0A1B0GTK4 181 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 SNAP23O00161 211 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 SH2B2O14492 632 aaPredicted RBP20.19■□□□□ 0.82
PTPN12-201ENST00000248594 TRIM37O94972 964 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 TCP1P17987 556 aaKnown RBP20.19■□□□□ 0.82
PTPN12-201ENST00000248594 PCK1P35558 622 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 OSBPL1AQ9BXW6 950 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 DDX21Q9NR30 783 aaKnown RBP eCLIP20.19■□□□□ 0.82
PTPN12-201ENST00000248594 CEP126Q9P2H0 1117 aa20.19■□□□□ 0.82
PTPN12-201ENST00000248594 NCAPD2Q15021 1401 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 POLE2P56282 527 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 SLC30A9Q6PML9 568 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 RRAGAQ7L523 313 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 CSGALNACT2Q8N6G5 542 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 STRN4Q9NRL3 753 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 PTPRUQ92729 1446 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 ANO9A1A5B4 782 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 SLC8A3P57103 927 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 SLC17A8Q8NDX2 589 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 TATDN2Q93075 761 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 TUBGCP2Q9BSJ2 902 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 NOC4LQ9BVI4 516 aaKnown RBP20.18■□□□□ 0.82
PTPN12-201ENST00000248594 NLRC4Q9NPP4 1024 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 AKAP4Q5JQC9 854 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 RPUSD2Q8IZ73 545 aaKnown RBP20.18■□□□□ 0.82
PTPN12-201ENST00000248594 PICK1Q9NRD5 415 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 MTMR7Q9Y216 660 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 NRKQ7Z2Y5 1582 aa20.18■□□□□ 0.82
PTPN12-201ENST00000248594 GCP02774 474 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 CTCFP49711 727 aaPredicted RBP20.17■□□□□ 0.82
PTPN12-201ENST00000248594 GFPT1Q06210 699 aaPredicted RBP20.17■□□□□ 0.82
PTPN12-201ENST00000248594 TTLL7Q6ZT98 887 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 ANKS4BQ8N8V4 417 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 PPP1R12CQ9BZL4 782 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 BIN2Q9UBW5 565 aaPredicted RBP20.17■□□□□ 0.82
PTPN12-201ENST00000248594 RFX5P48382 616 aaPredicted RBP20.17■□□□□ 0.82
PTPN12-201ENST00000248594 DRP2Q13474 957 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 ERICH1Q86X53 443 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 DNAAF5Q86Y56 855 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 FOXP2O15409 715 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 RAD51CO43502 376 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 HSD17B3P37058 310 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 KIF11P52732 1056 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 PTGDRQ13258 359 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 IP6K1Q92551 441 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 SALL4Q9UJQ4 1053 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 CAPN11Q9UMQ6 739 aa20.17■□□□□ 0.82
PTPN12-201ENST00000248594 LGALS16A8MUM7 142 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 TRAPPC3O43617 180 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 NEFHP12036 1026 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 PPP2R2AP63151 447 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 MIS18BP1Q6P0N0 1132 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 MLXIPLQ9NP71 852 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 RWDD2AQ9UIY3 292 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 RPN1P04843 607 aaKnown RBP20.16■□□□□ 0.82
PTPN12-201ENST00000248594 PECAM1P16284 738 aaPredicted RBP20.16■□□□□ 0.82
PTPN12-201ENST00000248594 GLE1Q53GS7 698 aaKnown RBP20.16■□□□□ 0.82
PTPN12-201ENST00000248594 ZNF790Q6PG37 636 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 ADAT2Q7Z6V5 191 aaKnown RBP20.16■□□□□ 0.82
PTPN12-201ENST00000248594 CAVIN3Q969G5 261 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 FBXL5Q9UKA1 691 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 PNMA2Q9UL42 364 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 XDHP47989 1333 aa20.16■□□□□ 0.82
PTPN12-201ENST00000248594 DIP2AQ14689 1571 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 RPS6KA3P51812 740 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 HELBQ8NG08 1087 aaPredicted RBP20.15■□□□□ 0.82
PTPN12-201ENST00000248594 EXOC1Q9NV70 894 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 CCT8L1PA6NM43 557 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 MGRN1O60291 552 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 CDC37Q16543 378 aaPredicted RBP20.15■□□□□ 0.82
PTPN12-201ENST00000248594 CACNA2D4Q7Z3S7 1137 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 ARHGEF10LQ9HCE6 1279 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 TBX22Q9Y458 520 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 NKRFO15226 690 aaKnown RBP eCLIP20.15■□□□□ 0.82
PTPN12-201ENST00000248594 STAT6P42226 847 aa20.15■□□□□ 0.82
PTPN12-201ENST00000248594 NTRK3Q16288 839 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms