RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.44■■□□□ 1.82
SYNGR3-201ENST00000248121 LAD1O00515 517 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 CCNT1O60563 726 aaKnown RBP26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 USP2O75604 605 aaPredicted RBP26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 PTPRAP18433 802 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 PRPHP41219 470 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 UBE2SQ16763 222 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 MTRQ99707 1265 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 RIC8AQ9NPQ8 531 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 ZC3H4Q9UPT8 1303 aaKnown RBP26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 PP2D1A8MPX8 630 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 SMTNL1A8MU46 457 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 POTEIP0CG38 1075 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 POTEJP0CG39 1038 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 PTGS1P23219 599 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 DPYDQ12882 1025 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 EAPPQ56P03 285 aaPredicted RBP26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 IQUBQ8NA54 791 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 TAF1DQ9H5J8 278 aaPredicted RBP26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 SH2D4AQ9H788 454 aa26.43■■□□□ 1.82
SYNGR3-201ENST00000248121 GOLGA6L6A8MZA4 724 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 CLK2P49760 499 aaKnown RBP26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 USH1GQ495M9 461 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 USP50Q70EL3 339 aaPredicted RBP26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 TRIML1Q8N9V2 468 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 MYH7BA7E2Y1 1941 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 MYL5Q02045 173 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 SPP2Q13103 211 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 CCDC186Q7Z3E2 898 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 DRC7Q8IY82 874 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 STAMQ92783 540 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 KIFC2Q96AC6 838 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 KIAA1683Q9H0B3 1180 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 PCDHA1Q9Y5I3 950 aa26.42■■□□□ 1.82
SYNGR3-201ENST00000248121 CCDC144BQ3MJ40 725 aa26.41■■□□□ 1.82
SYNGR3-201ENST00000248121 SUPT20HL1Q3ZLR7 823 aa26.41■■□□□ 1.82
SYNGR3-201ENST00000248121 HOOK2Q96ED9 719 aa26.41■■□□□ 1.82
SYNGR3-201ENST00000248121 EMILIN3Q9NT22 766 aa26.41■■□□□ 1.82
SYNGR3-201ENST00000248121 PTPRFP10586 1907 aa26.41■■□□□ 1.82
SYNGR3-201ENST00000248121 NEMFO60524 1076 aa26.4■■□□□ 1.82
SYNGR3-201ENST00000248121 OR52Z1P0C646 297 aa26.4■■□□□ 1.82
SYNGR3-201ENST00000248121 KARSQ15046 597 aaKnown RBP26.4■■□□□ 1.82
SYNGR3-201ENST00000248121 MOB2Q70IA6 237 aa26.4■■□□□ 1.82
SYNGR3-201ENST00000248121 MLKLQ8NB16 471 aa26.4■■□□□ 1.82
SYNGR3-201ENST00000248121 CCDC34Q96HJ3 373 aa26.4■■□□□ 1.82
SYNGR3-201ENST00000248121 SMC2O95347 1197 aa26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 TPM3P06753 285 aa26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 ATP1A3P13637 1013 aa26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 FMR1Q06787 632 aaKnown RBP eCLIP26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 NAALADL2Q58DX5 795 aa26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 MED15Q96RN5 788 aa26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 PYM1Q9BRP8 204 aaKnown RBP26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 GINM1Q9NU53 330 aa26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 ZHX2Q9Y6X8 837 aa26.39■■□□□ 1.82
SYNGR3-201ENST00000248121 POTEDQ86YR6 584 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 CNKSR2Q8WXI2 1034 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 CDCA5Q96FF9 252 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 PICK1Q9NRD5 415 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 DISC1Q9NRI5 854 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 RLFQ13129 1914 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 VCAM1P19320 739 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 VGLL4Q14135 290 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 CCDC174Q6PII3 467 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 CUL5Q93034 780 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 CCSER1Q9C0I3 900 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 SNCAIPQ9Y6H5 919 aa26.38■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L15C9J2P7 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L13C9JLJ4 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L11C9JVI0 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L18D6R9N7 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L22D6RA61 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L17D6RBQ6 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L19D6RCP7 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L20D6RJB6 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 OPLAHO14841 1288 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L24Q0WX57 530 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 ORC2Q13416 577 aaPredicted RBP26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 USP17L6PQ6QN14 398 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 FBXO11Q86XK2 927 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 LRRC15Q8TF66 581 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 GSDMAQ96QA5 445 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 AMNQ9BXJ7 453 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 XPO4Q9C0E2 1151 aaKnown RBP26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 TDP2O95551 362 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 TXLNAP40222 546 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 ZNF280CQ8ND82 737 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 MTMR9Q96QG7 549 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 P2RX7Q99572 595 aaKnown RBP26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 WDR18Q9BV38 432 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 BLZF1Q9H2G9 400 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 RANBP17Q9H2T7 1088 aaKnown RBP26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 PSTPIP2Q9H939 334 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 FANCLQ9NW38 375 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 IFNKQ9P0W0 207 aa26.37■■□□□ 1.81
SYNGR3-201ENST00000248121 COL11A1P12107 1806 aaPredicted RBP26.36■■□□□ 1.81
SYNGR3-201ENST00000248121 SLC37A4O43826 429 aa26.36■■□□□ 1.81
SYNGR3-201ENST00000248121 TPM4P67936 248 aa26.36■■□□□ 1.81
SYNGR3-201ENST00000248121 NOL9Q5SY16 702 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms