RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 HOMER1Q86YM7 354 aa24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 IGDCC4Q8TDY8 1250 aa24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 MORC4Q8TE76 937 aa24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 NUP133Q8WUM0 1156 aa24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 MPHOSPH6Q99547 160 aaKnown RBP24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 GPHNQ9NQX3 736 aaPredicted RBP24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 STARD7Q9NQZ5 370 aa24.6■■□□□ 1.53
HCFC1R1-201ENST00000248089 SMPD1P17405 629 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 PTGS1P23219 599 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 CST5P28325 142 aaPredicted RBP24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 MCM5P33992 734 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 PDE4DQ08499 809 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 NECTIN1Q15223 517 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 GNASQ5JWF2 1037 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 TAPT1Q6NXT6 567 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 PCSK9Q8NBP7 692 aaKnown RBP24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 LY9Q9HBG7 655 aa24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 MRPL11Q9Y3B7 192 aaKnown RBP24.59■■□□□ 1.53
HCFC1R1-201ENST00000248089 LOC102724159A0A0B4J2E5 919 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 ASGR1P07306 291 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 BEX3Q00994 111 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 TROAPQ12815 778 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 PWP2Q15269 919 aaKnown RBP24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 CCSAPQ6IQ19 270 aaPredicted RBP24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 NFXL1Q6ZNB6 911 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 MCF2L2Q86YR7 1114 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 RGS22Q8NE09 1264 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 DNERQ8NFT8 737 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 TBC1D5Q92609 795 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 LBHD1Q9BQE6 289 aaPredicted RBP24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 MYL10Q9BUA6 226 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 AMNQ9BXJ7 453 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 AP5M1Q9H0R1 490 aa24.58■■□□□ 1.53
HCFC1R1-201ENST00000248089 ZBTB5O15062 677 aa24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 PQBP1O60828 265 aaKnown RBP24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 TLE2Q04725 743 aa24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 COL9A3Q14050 684 aaPredicted RBP24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 RNF20Q5VTR2 975 aa24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 IQSEC1Q6DN90 963 aa24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 ZNF654Q8IZM8 581 aa24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 VTI1AQ96AJ9 217 aa24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 GLT1D1Q96MS3 346 aa24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 UBE2OQ9C0C9 1292 aaKnown RBP24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 GNEQ9Y223 722 aaKnown RBP24.57■■□□□ 1.52
HCFC1R1-201ENST00000248089 A0A1W2PPC1 479 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 DYNC1LI2O43237 492 aaPredicted RBP24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 PPP1R11O60927 126 aaPredicted RBP24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 BMP8BP34820 402 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 SLC35G1Q2M3R5 365 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 TMEM63BQ5T3F8 832 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 C1orf53Q5VUE5 145 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 MTMR8Q96EF0 704 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 PIGSQ96S52 555 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 PDLIM7Q9NR12 457 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 KIAA1217Q5T5P2 1943 aa24.56■■□□□ 1.52
HCFC1R1-201ENST00000248089 CCDC69A6NI79 296 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 B4DLN1 442 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 SH2B2O14492 632 aaPredicted RBP24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 CTAGE5O15320 804 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 DDAH1O94760 285 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 CFBP00751 764 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 MRPL12P52815 198 aaKnown RBP24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 FSCN1Q16658 493 aaKnown RBP24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 CTCFLQ8NI51 663 aaPredicted RBP24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 SYTL5Q8TDW5 730 aaPredicted RBP24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 PIBF1Q8WXW3 757 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 TMEM87BQ96K49 555 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 LRRC2Q9BYS8 371 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 WDR11Q9BZH6 1224 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 COL20A1Q9P218 1284 aa24.55■■□□□ 1.52
HCFC1R1-201ENST00000248089 EDNRBP24530 442 aa24.54■■□□□ 1.52
HCFC1R1-201ENST00000248089 TAAR1Q96RJ0 339 aa24.54■■□□□ 1.52
HCFC1R1-201ENST00000248089 MTA3Q9BTC8 594 aa24.54■■□□□ 1.52
HCFC1R1-201ENST00000248089 RIOX1Q9H6W3 641 aa24.54■■□□□ 1.52
HCFC1R1-201ENST00000248089 PCDHA1Q9Y5I3 950 aa24.54■■□□□ 1.52
HCFC1R1-201ENST00000248089 LAMA3Q16787 3333 aa24.53■■□□□ 1.52
HCFC1R1-201ENST00000248089 CYTH3O43739 400 aa24.53■■□□□ 1.52
HCFC1R1-201ENST00000248089 CLTBP09497 229 aa24.53■■□□□ 1.52
HCFC1R1-201ENST00000248089 DUSP28Q4G0W2 176 aa24.53■■□□□ 1.52
HCFC1R1-201ENST00000248089 SH3RF1Q7Z6J0 888 aa24.53■■□□□ 1.52
HCFC1R1-201ENST00000248089 OPLAHO14841 1288 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 RXRAP19793 462 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 KIF5BP33176 963 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 PPP2R5BQ15173 497 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 CXCL17Q6UXB2 119 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 RAB11FIP4Q86YS3 637 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 TDHQ8IZJ6 230 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 NSUN6Q8TEA1 469 aaKnown RBP24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 RMDN3Q96TC7 470 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 MAF1Q9H063 256 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 ELP1O95163 1332 aa24.52■■□□□ 1.52
HCFC1R1-201ENST00000248089 A0A0U1RQG5 324 aaPredicted RBP24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 ZEB2O60315 1214 aa24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 EIF2AK2P19525 551 aaKnown RBP24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 NKX3-2P78367 333 aa24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 ARHGEF16Q5VV41 709 aa24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 TMTC2Q8N394 836 aa24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 SCFD2Q8WU76 684 aa24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 Q9Y3F1 56 aa24.51■■□□□ 1.51
HCFC1R1-201ENST00000248089 SZT2Q5T011 3432 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms