RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 PRR5LQ6MZQ0 368 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 FBXO33Q7Z6M2 555 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 ENOX1Q8TC92 643 aaKnown RBP17.42■□□□□ 0.38
SIN3B-201ENST00000248054 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 LOC102724159A0A0B4J2E5 919 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 AP3B2Q13367 1082 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 PWP2Q15269 919 aaKnown RBP17.42■□□□□ 0.38
SIN3B-201ENST00000248054 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 TMEM47Q9BQJ4 181 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 WDR11Q9BZH6 1224 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 CCPG1Q9ULG6 757 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 PLEKHA8P1O95397 391 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 ALAS1P13196 640 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 CLCN6P51797 869 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 SEMA3FQ13275 785 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 JAKMIP2Q96AA8 810 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 TSKSQ9UJT2 592 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 CTIFO43310 598 aaKnown RBP17.41■□□□□ 0.38
SIN3B-201ENST00000248054 SEC31AO94979 1220 aaKnown RBP17.41■□□□□ 0.38
SIN3B-201ENST00000248054 STAT2P52630 851 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 ZNF658Q5TYW1 1059 aaPredicted RBP17.41■□□□□ 0.38
SIN3B-201ENST00000248054 ARHGEF16Q5VV41 709 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 USP17L2Q6R6M4 530 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 FAM76AQ8TAV0 307 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 KIF4AO95239 1232 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 SUPT20HL1Q3ZLR7 823 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 BRDTQ58F21 947 aaPredicted RBP17.41■□□□□ 0.38
SIN3B-201ENST00000248054 MACROD2A1Z1Q3 448 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 EXOC3O60645 756 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 NEDD1Q8NHV4 660 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 SYNCQ9H7C4 482 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 RIC8AQ9NPQ8 531 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 NOP56O00567 594 aaKnown RBP17.41■□□□□ 0.38
SIN3B-201ENST00000248054 ATP2A1O14983 1001 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 NAP1L3Q99457 506 aaPredicted RBP17.41■□□□□ 0.38
SIN3B-201ENST00000248054 FTOQ9C0B1 505 aaKnown RBP eCLIP17.41■□□□□ 0.38
SIN3B-201ENST00000248054 IKBKGQ9Y6K9 419 aa17.41■□□□□ 0.38
SIN3B-201ENST00000248054 SP4Q02446 784 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 C12orf60Q5U649 245 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 PNMA6AP0CW24 399 aaPredicted RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 GAP43P17677 238 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 TNFAIP3P21580 790 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 E2F4Q16254 413 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 KCNF1Q9H3M0 494 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 FEZ2Q9UHY8 353 aaPredicted RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 ECE2O60344 883 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 N4BP1O75113 896 aaKnown RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 FLOT1O75955 427 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 CYP2D6P10635 497 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 BCRP11274 1271 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 PSMD2Q13200 908 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 SFMBT2Q5VUG0 894 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 KCTD1Q719H9 257 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 NOX5Q96PH1 765 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 HOMER2Q9NSB8 354 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 ATP6V0A2Q9Y487 856 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 CLRN2A0PK11 232 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 PSDA5PKW4 1024 aaPredicted RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 CCDC121Q6ZUS5 278 aa17.4■□□□□ 0.38
SIN3B-201ENST00000248054 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 MTRF1LQ9UGC7 380 aaKnown RBP17.4■□□□□ 0.38
SIN3B-201ENST00000248054 CLUL1Q15846 466 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 TEX2Q8IWB9 1127 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 SECISBP2LQ93073 1101 aaKnown RBP17.39■□□□□ 0.37
SIN3B-201ENST00000248054 GPR101Q96P66 508 aaPredicted RBP17.39■□□□□ 0.37
SIN3B-201ENST00000248054 MAN1B1Q9UKM7 699 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 SLIT3O75094 1523 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 DDX39AO00148 427 aaKnown RBP17.39■□□□□ 0.37
SIN3B-201ENST00000248054 DPCR1Q3MIW9 517 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 CEP128Q6ZU80 1094 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 CROCCP2Q86T23 111 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 SULF1Q8IWU6 871 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 NELFCDQ8IXH7 590 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 CASP7P55210 303 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 TBC1D16Q8TBP0 767 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 ATRIPQ8WXE1 791 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 XRCC5P13010 732 aaKnown RBP17.39■□□□□ 0.37
SIN3B-201ENST00000248054 DNAJC21Q5F1R6 531 aaKnown RBP17.39■□□□□ 0.37
SIN3B-201ENST00000248054 RPGRIP1Q96KN7 1286 aa17.39■□□□□ 0.37
SIN3B-201ENST00000248054 RETREG2Q8NC44 543 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.38■□□□□ 0.37
SIN3B-201ENST00000248054 RWDD2AQ9UIY3 292 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 ASNSP08243 561 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 CDC27P30260 824 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 MAGEA1P43355 309 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 CFAP58Q5T655 872 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 BPIFA3Q9BQP9 254 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 HSPA1LP34931 641 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 CDC37Q16543 378 aaPredicted RBP17.38■□□□□ 0.37
SIN3B-201ENST00000248054 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
SIN3B-201ENST00000248054 OTUD6BQ8N6M0 293 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms