RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 RAD9BQ6WBX8 426 aa24.58■■□□□ 1.52
RNF39-201ENST00000244360 ADGRF4Q8IZF3 695 aa24.58■■□□□ 1.52
RNF39-201ENST00000244360 MTMR8Q96EF0 704 aa24.58■■□□□ 1.52
RNF39-201ENST00000244360 DHTKD1Q96HY7 919 aaPredicted RBP24.58■■□□□ 1.52
RNF39-201ENST00000244360 VPS16Q9H269 839 aa24.58■■□□□ 1.52
RNF39-201ENST00000244360 TRIM49BA6NDI0 452 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 NFIAQ12857 509 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 TTI2Q6NXR4 508 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 NOC3LQ8WTT2 800 aaKnown RBP24.57■■□□□ 1.52
RNF39-201ENST00000244360 CCDC17Q96LX7 622 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 WDR24Q96S15 920 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 DESI2Q9BSY9 194 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 ADGRG1Q9Y653 693 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 PPP1R11O60927 126 aaPredicted RBP24.57■■□□□ 1.52
RNF39-201ENST00000244360 PPP2R3AQ06190 1150 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 CPLX3Q8WVH0 158 aa24.57■■□□□ 1.52
RNF39-201ENST00000244360 SIPA1L1O43166 1804 aa24.56■■□□□ 1.52
RNF39-201ENST00000244360 CLK2P49760 499 aaKnown RBP24.56■■□□□ 1.52
RNF39-201ENST00000244360 CALCRLQ16602 461 aa24.56■■□□□ 1.52
RNF39-201ENST00000244360 COBLL1Q53SF7 1204 aa24.56■■□□□ 1.52
RNF39-201ENST00000244360 G3V3G9 751 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 DCAF8Q5TAQ9 597 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 CCDC47Q96A33 483 aaKnown RBP24.55■■□□□ 1.52
RNF39-201ENST00000244360 CALML4Q96GE6 196 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 DNAJC18Q9H819 358 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 MRPL44Q9H9J2 332 aaKnown RBP24.55■■□□□ 1.52
RNF39-201ENST00000244360 LGALS16A8MUM7 142 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 ZNF646O15015 1829 aaPredicted RBP24.55■■□□□ 1.52
RNF39-201ENST00000244360 SLC37A4O43826 429 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 PPP1R2P41236 205 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 AMPD3Q01432 767 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 RABGGTAQ92696 567 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 STK17AQ9UEE5 414 aa24.55■■□□□ 1.52
RNF39-201ENST00000244360 HDLBPQ00341 1268 aaKnown RBP24.54■■□□□ 1.52
RNF39-201ENST00000244360 GRB10Q13322 594 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 TUBB2AQ13885 445 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 PPP4R3AQ6IN85 833 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 RSRC2Q7L4I2 434 aaKnown RBP24.54■■□□□ 1.52
RNF39-201ENST00000244360 TUBB2BQ9BVA1 445 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 EXOC1Q9NV70 894 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 MYH4Q9Y623 1939 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 A0A1W2PQC6 194 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 TDP2O95551 362 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 TXKP42681 527 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 PDIA5Q14554 519 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 STRIP1Q5VSL9 837 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 TTBK2Q6IQ55 1244 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 ZFPM1Q8IX07 1006 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 DUSP9Q99956 384 aaKnown RBP24.54■■□□□ 1.52
RNF39-201ENST00000244360 DHX36Q9H2U1 1008 aaKnown RBP24.54■■□□□ 1.52
RNF39-201ENST00000244360 DBNDD1Q9H9R9 158 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 ABHD10Q9NUJ1 306 aa24.54■■□□□ 1.52
RNF39-201ENST00000244360 ZBTB5O15062 677 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 TMTC1Q8IUR5 882 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 ZNF507Q8TCN5 953 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 GOLGA1Q92805 767 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 TRIM47Q96LD4 638 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 IDI2Q9BXS1 227 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 LRWD1Q9UFC0 647 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 NPM3O75607 178 aaKnown RBP24.53■■□□□ 1.52
RNF39-201ENST00000244360 CCNE1P24864 410 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 ASIC1P78348 528 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 PDE4DQ08499 809 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 TMEM266Q2M3C6 531 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 DACT2Q5SW24 774 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 PNMA5Q96PV4 448 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 KCNQ5Q9NR82 932 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 BLOC1S4Q9NUP1 217 aa24.53■■□□□ 1.52
RNF39-201ENST00000244360 APBA3O96018 575 aa24.52■■□□□ 1.52
RNF39-201ENST00000244360 UBXN1Q04323 297 aa24.52■■□□□ 1.52
RNF39-201ENST00000244360 STYK1Q6J9G0 422 aa24.52■■□□□ 1.52
RNF39-201ENST00000244360 MB21D1Q8N884 522 aa24.52■■□□□ 1.52
RNF39-201ENST00000244360 CUL5Q93034 780 aa24.52■■□□□ 1.52
RNF39-201ENST00000244360 P2RX5Q93086 422 aa24.52■■□□□ 1.52
RNF39-201ENST00000244360 MKL1Q969V6 931 aa24.52■■□□□ 1.52
RNF39-201ENST00000244360 BICDL2A1A5D9 508 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 RNF225M0QZC1 329 aaPredicted RBP24.51■■□□□ 1.51
RNF39-201ENST00000244360 MPHOSPH10O00566 681 aaKnown RBP24.51■■□□□ 1.51
RNF39-201ENST00000244360 TUBB4BP68371 445 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 STK4Q13043 487 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 CCDC96Q2M329 555 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 ZNF622Q969S3 477 aaKnown RBP eCLIP24.51■■□□□ 1.51
RNF39-201ENST00000244360 RAB34Q9BZG1 259 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 KIF5CO60282 957 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 PLA2G4AP47712 749 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 C2CD5Q86YS7 1000 aa24.51■■□□□ 1.51
RNF39-201ENST00000244360 USP17L10C9JJH3 530 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 TNNI2P48788 182 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 MRPL12P52815 198 aaKnown RBP24.5■■□□□ 1.51
RNF39-201ENST00000244360 ERVK-24P63145 666 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 UBE2SQ16763 222 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 CNNM4Q6P4Q7 775 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 NYAP2Q9P242 653 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 FAM198AQ9UFP1 575 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 SCN9AQ15858 1988 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 CCDC66A2RUB6 948 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 SLC16A2P36021 539 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 SV2BQ7L1I2 683 aa24.5■■□□□ 1.51
RNF39-201ENST00000244360 NUP88Q99567 741 aaPredicted RBP24.5■■□□□ 1.51
RNF39-201ENST00000244360 MAGEC2Q9UBF1 373 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms