RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 BLZF1Q9H2G9 400 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 SLC4A7Q9Y6M7 1214 aa14.05□□□□□ -0.16
VAMP4-201ENST00000236192 I3L4J1 428 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 SPAG7O75391 227 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ZBED6P86452 979 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ITSN2Q9NZM3 1697 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 E7ENQ6 273 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 RAD9BQ6WBX8 426 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ANKRD13CQ8N6S4 541 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 DRAXINQ8NBI3 349 aaPredicted RBP14.04□□□□□ -0.16
VAMP4-201ENST00000236192 GRAMD1AQ96CP6 724 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 LRRC37BQ96QE4 947 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 CNNM2Q9H8M5 875 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 NDUFA13Q9P0J0 144 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ATXN10Q9UBB4 475 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 L3MBTL1Q9Y468 752 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 MYOM2P54296 1465 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 PDIA3P30101 505 aaKnown RBP14.04□□□□□ -0.16
VAMP4-201ENST00000236192 MCM7P33993 719 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ARMC3Q5W041 872 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 NANOGNBQ7Z5D8 188 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ANKRD35Q8N283 1001 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 GDAP1Q8TB36 358 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 TUBA8Q9NY65 449 aaPredicted RBP14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ZMYM6O95789 1325 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 KIAA0232Q92628 1395 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 A0A0D9SFI3 127 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 BACH1O14867 736 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 MYBL1P10243 752 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 PDE4DQ08499 809 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 CNNM4Q6P4Q7 775 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 UIMC1Q96RL1 719 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 POLD4Q9HCU8 107 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 ASIC3Q9UHC3 531 aa14.04□□□□□ -0.16
VAMP4-201ENST00000236192 SRRM3A6NNA2 597 aaPredicted RBP14.03□□□□□ -0.16
VAMP4-201ENST00000236192 TMOD1P28289 359 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 CDR2Q01850 454 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 KLC3Q6P597 504 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 ESYT3A0FGR9 886 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 E7EWF7 191 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 MCF2LO15068 1137 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 EPB41P11171 864 aaKnown RBP14.03□□□□□ -0.16
VAMP4-201ENST00000236192 KIF2BQ8N4N8 673 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 GYG2O15488 501 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 HNRNPCL1O60812 293 aaKnown RBP14.03□□□□□ -0.16
VAMP4-201ENST00000236192 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 SREK1Q8WXA9 508 aaKnown RBP14.03□□□□□ -0.16
VAMP4-201ENST00000236192 PFDN4Q9NQP4 134 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 RWDD2AQ9UIY3 292 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 SNX12Q9UMY4 172 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 ABLIM1O14639 778 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 RXRAP19793 462 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 AP2B1P63010 937 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 KRT31Q15323 416 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 ZNF174Q15697 407 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 DAB2IPQ5VWQ8 1189 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 UBE3BQ7Z3V4 1068 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 TTLL11Q8NHH1 800 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 KIFAP3Q92845 792 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 ANKRD2Q9GZV1 360 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 UBA5Q9GZZ9 404 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 SLC39A2Q9NP94 309 aa14.03□□□□□ -0.16
VAMP4-201ENST00000236192 DMAP1Q9NPF5 467 aaPredicted RBP14.03□□□□□ -0.16
VAMP4-201ENST00000236192 PTPRGP23470 1445 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 ADGRL2O95490 1459 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 DEXIO95424 95 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.16
VAMP4-201ENST00000236192 RAB27AP51159 221 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 SLC9C2Q5TAH2 1124 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 TRAPPC11Q7Z392 1133 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
VAMP4-201ENST00000236192 KDM1AO60341 852 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 CHN1P15882 459 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 BYSLQ13895 437 aaKnown RBP14.02□□□□□ -0.16
VAMP4-201ENST00000236192 RESP18Q5W5W9 173 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 KCNV1Q6PIU1 500 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 NOSTRINQ8IVI9 506 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 TRIML2Q8N7C3 387 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 MTRQ99707 1265 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 EHD4Q9H223 541 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 ALDH8A1Q9H2A2 487 aaPredicted RBP14.02□□□□□ -0.16
VAMP4-201ENST00000236192 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.16
VAMP4-201ENST00000236192 XAB2Q9HCS7 855 aaKnown RBP14.02□□□□□ -0.16
VAMP4-201ENST00000236192 NDE1Q9NXR1 346 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 NUB1Q9Y5A7 615 aa14.02□□□□□ -0.16
VAMP4-201ENST00000236192 PRDM15P57071 1507 aaPredicted RBP14.02□□□□□ -0.17
VAMP4-201ENST00000236192 CTNNA2P26232 953 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 CDC25CP30307 473 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 MAGEA8P43361 318 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 WDR75Q8IWA0 830 aaKnown RBP14.02□□□□□ -0.17
VAMP4-201ENST00000236192 NR1H4Q96RI1 486 aaPredicted RBP14.02□□□□□ -0.17
VAMP4-201ENST00000236192 FGFR1OP2Q9NVK5 253 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 TRAF3IP3Q9Y228 551 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 SHOX2O60902 331 aaPredicted RBP14.02□□□□□ -0.17
VAMP4-201ENST00000236192 CYP27A1Q02318 531 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms