RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 MAF1Q9H063 256 aa11.69□□□□□ -0.54
HMGCL-201ENST00000235958 C6orf50Q9HD87 102 aa11.69□□□□□ -0.54
HMGCL-201ENST00000235958 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
HMGCL-201ENST00000235958 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
HMGCL-201ENST00000235958 KIF3AQ9Y496 699 aa11.69□□□□□ -0.54
HMGCL-201ENST00000235958 MGAMO43451 1857 aa11.69□□□□□ -0.54
HMGCL-201ENST00000235958 DNAJC25-GNG10A0A024R161 153 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 ESYT2A0FGR8 921 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 GCOM1H8Y6P7 765 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-201ENST00000235958 PGK2P07205 417 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 POLR2MP0CAP2 368 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 CALML3P27482 149 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 HOXD10P28358 340 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 ADORA2AP29274 412 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 GNA11P29992 359 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 HSD17B4P51659 736 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 ADCY7P51828 1080 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 LBX1P52954 281 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 GUCY1B3Q02153 619 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 CNTN2Q02246 1040 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 TRIM29Q14134 588 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 GRB14Q14449 540 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 ARHGEF6Q15052 776 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 MORN1Q5T089 497 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 KRT40Q6A162 431 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 DPP9Q86TI2 863 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 FAM177A1Q8N128 213 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-201ENST00000235958 USP6NLQ92738 828 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 CUL5Q93034 780 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
HMGCL-201ENST00000235958 PHF20Q9BVI0 1012 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 GLT8D2Q9H1C3 349 aa11.68□□□□□ -0.54
HMGCL-201ENST00000235958 MAP3K20Q9NYL2 800 aaKnown RBP11.68□□□□□ -0.54
HMGCL-201ENST00000235958 PFASO15067 1338 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 PIK3CDO00329 1044 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 GNRH1P01148 92 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 GHRHRQ02643 423 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 NPY5RQ15761 445 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 UBE2SQ16763 222 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 GALNT17Q6IS24 598 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 FCHSD1Q86WN1 690 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 BLIDQ8IZY5 108 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 FAM133AQ8N9E0 248 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 SYTL5Q8TDW5 730 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-201ENST00000235958 TAAR1Q96RJ0 339 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 COL20A1Q9P218 1284 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 BIN2Q9UBW5 565 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-201ENST00000235958 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-201ENST00000235958 SRRDQ9UH36 339 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 GABRQQ9UN88 632 aa11.67□□□□□ -0.54
HMGCL-201ENST00000235958 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 CYP2B6P20813 491 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 PDCP20941 246 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 SYT1P21579 422 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 FLT3LGP49771 235 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 ZNF792Q3KQV3 632 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 JAKMIP3Q5VZ66 844 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 TEX2Q8IWB9 1127 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 NPLOC4Q8TAT6 608 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 BICD2Q8TD16 824 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 OXER1Q8TDS5 423 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 TMEM260Q9NX78 707 aa11.66□□□□□ -0.54
HMGCL-201ENST00000235958 ZSWIM8A7E2V4 1837 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 BTBD18B2RXH4 712 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 H3BQV1 296 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 M0R2N6 131 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 FOSP01100 380 aaPredicted RBP11.65□□□□□ -0.54
HMGCL-201ENST00000235958 MMP1P03956 469 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 HOXC6P09630 235 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 XRCC5P13010 732 aaKnown RBP11.65□□□□□ -0.54
HMGCL-201ENST00000235958 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.54
HMGCL-201ENST00000235958 PRKCZQ05513 592 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 SAFBQ15424 915 aaKnown RBP eCLIP11.65□□□□□ -0.54
HMGCL-201ENST00000235958 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 OTOP1Q7RTM1 612 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 REXO1Q8N1G1 1221 aaKnown RBP11.65□□□□□ -0.54
HMGCL-201ENST00000235958 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 RASGRP4Q8TDF6 673 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 RMDN3Q96TC7 470 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 SLC5A4Q9NY91 659 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 DIS3Q9Y2L1 958 aaKnown RBP11.65□□□□□ -0.54
HMGCL-201ENST00000235958 TRIM17Q9Y577 477 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
HMGCL-201ENST00000235958 PLXNB2O15031 1838 aa11.65□□□□□ -0.55
HMGCL-201ENST00000235958 SPDYE3A6NKU9 549 aa11.64□□□□□ -0.55
HMGCL-201ENST00000235958 KRT2P35908 639 aa11.64□□□□□ -0.55
HMGCL-201ENST00000235958 RGS2P41220 211 aa11.64□□□□□ -0.55
HMGCL-201ENST00000235958 NR5A1Q13285 461 aa11.64□□□□□ -0.55
HMGCL-201ENST00000235958 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
HMGCL-201ENST00000235958 DIS3L2Q8IYB7 885 aaKnown RBP11.64□□□□□ -0.55
HMGCL-201ENST00000235958 DNERQ8NFT8 737 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms