RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TLR7Q9NYK1 1049 aaKnown RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 TTC26A0AVF1 554 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 ESYT3A0FGR9 886 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 ZSCAN5CA6NGD5 496 aaPredicted RBP14.34□□□□□ -0.11
MSH2-201ENST00000233146 BAG3O95817 575 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 DESP17661 470 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 PCK1P35558 622 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 KLHL10Q6JEL2 608 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
MSH2-201ENST00000233146 CHD1O14646 1710 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 ZNF609O15014 1411 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
MSH2-201ENST00000233146 HEXIM1O94992 359 aaKnown RBP14.34□□□□□ -0.11
MSH2-201ENST00000233146 MSH2P43246 934 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 GUCY2DQ02846 1103 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 ZNF844Q08AG5 666 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 ODF2Q5BJF6 829 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 AKNAD1Q5T1N1 836 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 PHC3Q8NDX5 983 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 CASKIN2Q8WXE0 1202 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 CDK19Q9BWU1 502 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 FAM129AQ9BZQ8 928 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 ARHGEF3Q9NR81 526 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 EHD2Q9NZN4 543 aa14.34□□□□□ -0.11
MSH2-201ENST00000233146 MACROD2A1Z1Q3 448 aa14.33□□□□□ -0.11
MSH2-201ENST00000233146 FLOT1O75955 427 aa14.33□□□□□ -0.11
MSH2-201ENST00000233146 COPB1P53618 953 aaKnown RBP14.33□□□□□ -0.11
MSH2-201ENST00000233146 ATP11AP98196 1134 aa14.33□□□□□ -0.11
MSH2-201ENST00000233146 BEND3Q5T5X7 828 aa14.33□□□□□ -0.11
MSH2-201ENST00000233146 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.11
MSH2-201ENST00000233146 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.11
MSH2-201ENST00000233146 DLGAP2Q9P1A6 1054 aa14.33□□□□□ -0.11
MSH2-201ENST00000233146 ABCC12Q96J65 1359 aa14.33□□□□□ -0.11
MSH2-201ENST00000233146 E7ENQ6 273 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 ZNF131P52739 623 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 VPS37DQ86XT2 251 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 AFAP1Q8N556 730 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 SLC35B4Q969S0 331 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 EDC3Q96F86 508 aaKnown RBP14.33□□□□□ -0.12
MSH2-201ENST00000233146 VPS16Q9H269 839 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 VCXQ9H320 206 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 ECT2Q9H8V3 914 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 HYOU1Q9Y4L1 999 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 MST1RQ04912 1400 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 SMAPO00193 183 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 HSD17B3P37058 310 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 PAFAH1B1P43034 410 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.12
MSH2-201ENST00000233146 EIF4A2Q14240 407 aaKnown RBP14.33□□□□□ -0.12
MSH2-201ENST00000233146 MEA1Q16626 185 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 GALNTL6Q49A17 601 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 KANK3Q6NY19 840 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 NFRKBQ6P4R8 1299 aa14.33□□□□□ -0.12
MSH2-201ENST00000233146 PHAXQ9H814 394 aaKnown RBP14.33□□□□□ -0.12
MSH2-201ENST00000233146 TMEM221A6NGB7 291 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 ACTN4O43707 911 aaKnown RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 UBOX5O94941 541 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 CYLC1P35663 651 aaPredicted RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 KIF5AQ12840 1032 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 TTF1Q15361 905 aaPredicted RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 WASHC4Q2M389 1173 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 GALNT17Q6IS24 598 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 ABCF3Q9NUQ8 709 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 E7EWF7 191 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 HIP1RO75146 1068 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 LGR5O75473 907 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 ZNF189O75820 626 aaPredicted RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 MBD4O95243 580 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 MCMDC2Q4G0Z9 681 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 CHST3Q7LGC8 479 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 NME9Q86XW9 330 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 OR2W6PQ8NHA6 318 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 C17orf50Q8WW18 174 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 AZIN2Q96A70 460 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 CNOT10Q9H9A5 744 aaKnown RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 CTNNAL1Q9UBT7 734 aa14.32□□□□□ -0.12
MSH2-201ENST00000233146 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 LUC7L2Q9Y383 392 aaKnown RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 BZW2Q9Y6E2 419 aaKnown RBP14.32□□□□□ -0.12
MSH2-201ENST00000233146 GSTA2P09210 222 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 ACADSP16219 412 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 UAP1Q16222 522 aaPredicted RBP14.31□□□□□ -0.12
MSH2-201ENST00000233146 NOVA2Q9UNW9 492 aaKnown RBP14.31□□□□□ -0.12
MSH2-201ENST00000233146 TACC1O75410 805 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 PAX3P23760 479 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 PLS1Q14651 629 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 WAPLQ7Z5K2 1190 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.31□□□□□ -0.12
MSH2-201ENST00000233146 AGAP3Q96P47 875 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 MTRQ99707 1265 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 NKX1-2Q9UD57 310 aaPredicted RBP14.31□□□□□ -0.12
MSH2-201ENST00000233146 TSKSQ9UJT2 592 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
MSH2-201ENST00000233146 CAPN6Q9Y6Q1 641 aa14.31□□□□□ -0.12
MSH2-201ENST00000233146 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms