RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 NONOQ15233 471 aaKnown RBP eCLIP13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 SYCP1Q15431 976 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 ADALQ6DHV7 355 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 CNNM3Q8NE01 707 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 COL4A5P29400 1685 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 ATP1A3P13637 1013 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 SLC35G1Q2M3R5 365 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 CUL5Q93034 780 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 CNTNAP1P78357 1384 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 SERPINC1P01008 464 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 HIRAP54198 1017 aaPredicted RBP13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 ARMCX5Q6P1M9 558 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 HOOK2Q96ED9 719 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 CSADQ9Y600 493 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 STXBP3O00186 592 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 NRDCO43847 1150 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 ADAMTS3O15072 1205 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 GRIN3BO60391 1043 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 HMGCS2P54868 508 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 CREBRFQ8IUR6 639 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 DHX58Q96C10 678 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
TNFAIP1-201ENST00000226225 AFMP43652 599 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 UBXN2AP68543 259 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 NAT10Q9H0A0 1025 aaKnown RBP13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 POLR2DO15514 142 aaKnown RBP13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 ZNF202O95125 648 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 PFKFB1P16118 471 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 EPHX2P34913 555 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 LMAN1P49257 510 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 WDR78Q5VTH9 848 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 STAMQ92783 540 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 IGKV6D-41A0A0C4DH26 115 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 ANKRD65E5RJM6 399 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 NEMFO60524 1076 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 ALAS1P13196 640 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 TXLNAP40222 546 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 TXKP42681 527 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 GRIN1Q05586 938 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 KCNH3Q9ULD8 1083 aa13.18□□□□□ -0.3
TNFAIP1-201ENST00000226225 KRT25Q7Z3Z0 450 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 TMX2Q9Y320 296 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 A0A1B0GUL6 1792 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 LRRC37AA6NMS7 1700 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 TRIM66O15016 1216 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 UBA7P41226 1012 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 RAD51AP2Q09MP3 1159 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 MOB2Q70IA6 237 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 CSRNP2Q9H175 543 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 RIOX1Q9H6W3 641 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 PCDHA6Q9UN73 950 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 PCDHA8Q9Y5H6 950 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 CTNND1O60716 968 aaKnown RBP13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 OAS2P29728 719 aaKnown RBP13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 DTHD1Q6ZMT9 781 aa13.17□□□□□ -0.3
TNFAIP1-201ENST00000226225 ATRNL1Q5VV63 1379 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 EPSTI1Q96J88 318 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 CUTAO60888 179 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 KARSQ15046 597 aaKnown RBP13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 CCPG1Q9ULG6 757 aa13.16□□□□□ -0.3
TNFAIP1-201ENST00000226225 WNT7AO00755 349 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 GNG11P61952 73 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 GRM1Q13255 1194 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP49Q70CQ1 688 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 MKL1Q969V6 931 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 CDK5RAP3Q96JB5 506 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms