RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 GBP4Q96PP9 640 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 USP28Q96RU2 1077 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 GCOM1H8Y6P7 765 aaPredicted RBP26.28■■□□□ 1.8
USF2-201ENST00000222305 PIK3CDO00329 1044 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 POLR2MP0CAP2 368 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 ATP2B1P20020 1258 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 INF2Q27J81 1249 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 ANKRD13CQ8N6S4 541 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 GTF3C2Q8WUA4 911 aaPredicted RBP26.28■■□□□ 1.8
USF2-201ENST00000222305 MOV10L1Q9BXT6 1211 aaKnown RBP26.28■■□□□ 1.8
USF2-201ENST00000222305 GDPD2Q9HCC8 539 aa26.28■■□□□ 1.8
USF2-201ENST00000222305 VEGFBP49765 207 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 ERVK-9P63128 1117 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 ERVK-24P63145 666 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 KRT85P78386 507 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 NOGQ13253 232 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 NONOQ15233 471 aaKnown RBP eCLIP26.27■■□□□ 1.8
USF2-201ENST00000222305 TKFCQ3LXA3 575 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 FCHSD1Q86WN1 690 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 MCF2L2Q86YR7 1114 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 ZNF396Q96N95 335 aaPredicted RBP26.27■■□□□ 1.8
USF2-201ENST00000222305 PLXNB2O15031 1838 aa26.27■■□□□ 1.8
USF2-201ENST00000222305 WNT7AO00755 349 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 FIBPO43427 364 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 HSD17B4P51659 736 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 TAF1CQ15572 869 aaPredicted RBP26.26■■□□□ 1.79
USF2-201ENST00000222305 RILPL1Q5EBL4 403 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 NSMFQ6X4W1 530 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 NCAPG2Q86XI2 1143 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 R3HDMLQ9H3Y0 253 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 ACAD9Q9H845 621 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 ZCCHC17Q9NP64 241 aaKnown RBP26.26■■□□□ 1.79
USF2-201ENST00000222305 CLIC4Q9Y696 253 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 PCNTO95613 3336 aa26.26■■□□□ 1.79
USF2-201ENST00000222305 TM4SF4P48230 202 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 GCLCP48506 637 aaPredicted RBP26.25■■□□□ 1.79
USF2-201ENST00000222305 AP3B2Q13367 1082 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 SLC30A10Q6XR72 485 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 TBCKQ8TEA7 893 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 ANO3Q9BYT9 981 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 NOL7Q9UMY1 257 aaKnown RBP26.25■■□□□ 1.79
USF2-201ENST00000222305 SPDYE3A6NKU9 549 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 HSPA6P17066 643 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 CHST13Q8NET6 341 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 PCDHB6Q9Y5E3 794 aa26.25■■□□□ 1.79
USF2-201ENST00000222305 ERCC3P19447 782 aa26.24■■□□□ 1.79
USF2-201ENST00000222305 RPS6P62753 249 aaKnown RBP26.24■■□□□ 1.79
USF2-201ENST00000222305 GHRHRQ02643 423 aa26.24■■□□□ 1.79
USF2-201ENST00000222305 RNF207Q6ZRF8 634 aa26.24■■□□□ 1.79
USF2-201ENST00000222305 COL20A1Q9P218 1284 aa26.24■■□□□ 1.79
USF2-201ENST00000222305 TTC38Q5R3I4 469 aa26.23■■□□□ 1.79
USF2-201ENST00000222305 GPRC5AQ8NFJ5 357 aa26.23■■□□□ 1.79
USF2-201ENST00000222305 A1CFQ9NQ94 594 aaKnown RBP26.23■■□□□ 1.79
USF2-201ENST00000222305 CFAP45Q9UL16 551 aa26.23■■□□□ 1.79
USF2-201ENST00000222305 ADGRA2Q96PE1 1338 aa26.23■■□□□ 1.79
USF2-201ENST00000222305 SLC25A27O95847 323 aa26.22■■□□□ 1.79
USF2-201ENST00000222305 FOSP01100 380 aaPredicted RBP26.22■■□□□ 1.79
USF2-201ENST00000222305 BAATQ14032 418 aaPredicted RBP26.22■■□□□ 1.79
USF2-201ENST00000222305 SF3A1Q15459 793 aaKnown RBP26.22■■□□□ 1.79
USF2-201ENST00000222305 ANO1Q5XXA6 986 aa26.22■■□□□ 1.79
USF2-201ENST00000222305 ATL3Q6DD88 541 aa26.22■■□□□ 1.79
USF2-201ENST00000222305 TEX2Q8IWB9 1127 aa26.22■■□□□ 1.79
USF2-201ENST00000222305 SYTL5Q8TDW5 730 aaPredicted RBP26.22■■□□□ 1.79
USF2-201ENST00000222305 PORCNQ9H237 461 aa26.22■■□□□ 1.79
USF2-201ENST00000222305 MORF4L1Q9UBU8 362 aa26.22■■□□□ 1.79
USF2-201ENST00000222305 CPA4Q9UI42 421 aa26.22■■□□□ 1.79
USF2-201ENST00000222305 TRAPPC10P48553 1259 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 MCTP2Q6DN12 878 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 NEK8Q86SG6 692 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 POLR3EQ9NVU0 708 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 RTEL1Q9NZ71 1219 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 FBXO40Q9UH90 709 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 ZNF174Q15697 407 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 LETM2Q2VYF4 491 aa26.21■■□□□ 1.79
USF2-201ENST00000222305 PURBQ96QR8 312 aaKnown RBP26.21■■□□□ 1.79
USF2-201ENST00000222305 MAP3K20Q9NYL2 800 aaKnown RBP26.21■■□□□ 1.79
USF2-201ENST00000222305 PLXNA1Q9UIW2 1896 aa26.2■■□□□ 1.79
USF2-201ENST00000222305 EDIL3O43854 480 aa26.2■■□□□ 1.78
USF2-201ENST00000222305 FAM110CQ1W6H9 321 aa26.2■■□□□ 1.78
USF2-201ENST00000222305 WDR78Q5VTH9 848 aa26.2■■□□□ 1.78
USF2-201ENST00000222305 SAMD3Q8N6K7 520 aa26.2■■□□□ 1.78
USF2-201ENST00000222305 LEO1Q8WVC0 666 aaPredicted RBP26.2■■□□□ 1.78
USF2-201ENST00000222305 SPATA32Q96LK8 384 aa26.2■■□□□ 1.78
USF2-201ENST00000222305 EFCC1Q9HA90 598 aa26.2■■□□□ 1.78
USF2-201ENST00000222305 CYP39A1Q9NYL5 469 aa26.2■■□□□ 1.78
USF2-201ENST00000222305 MCM4P33991 863 aa26.19■■□□□ 1.78
USF2-201ENST00000222305 COPB2P35606 906 aa26.19■■□□□ 1.78
USF2-201ENST00000222305 NASPP49321 788 aaPredicted RBP26.19■■□□□ 1.78
USF2-201ENST00000222305 UBXN2AP68543 259 aa26.19■■□□□ 1.78
USF2-201ENST00000222305 CRHR2Q13324 411 aa26.19■■□□□ 1.78
USF2-201ENST00000222305 ANKRD35Q8N283 1001 aa26.19■■□□□ 1.78
USF2-201ENST00000222305 SCAND2PQ9GZW5 306 aaPredicted RBP26.19■■□□□ 1.78
USF2-201ENST00000222305 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.19■■□□□ 1.78
USF2-201ENST00000222305 THSD7BQ9C0I4 1608 aa26.19■■□□□ 1.78
USF2-201ENST00000222305 MCM7P33993 719 aa26.18■■□□□ 1.78
USF2-201ENST00000222305 SREBF1P36956 1147 aa26.18■■□□□ 1.78
USF2-201ENST00000222305 CCNA1P78396 465 aa26.18■■□□□ 1.78
USF2-201ENST00000222305 STK38Q15208 465 aa26.18■■□□□ 1.78
USF2-201ENST00000222305 LINC00301Q8NCQ3 95 aa26.18■■□□□ 1.78
USF2-201ENST00000222305 SHCBP1Q8NEM2 672 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms