RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 A0A1W2PQC6 194 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 EZH2Q15910 746 aaKnown RBP12.43□□□□□ -0.42
NEFM-201ENST00000221166 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 RCSD1Q6JBY9 416 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 GIMAP8Q8ND71 665 aaPredicted RBP12.43□□□□□ -0.42
NEFM-201ENST00000221166 PIGSQ96S52 555 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 TRIM9Q9C026 710 aa12.43□□□□□ -0.42
NEFM-201ENST00000221166 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 RHOBTB3O94955 611 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 TTI2Q6NXR4 508 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 SNX29Q8TEQ0 813 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 COA7Q96BR5 231 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 DNAJC7Q99615 494 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 POLD4Q9HCU8 107 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 PCDHA13Q9Y5I0 950 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 ALS2Q96Q42 1657 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 ZEB2O60315 1214 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 FGFR1OPO95684 399 aaKnown RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 AMPD2Q01433 879 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 CALCRLQ16602 461 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 SRLQ86TD4 932 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 KANSL2Q9H9L4 492 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 ZNF287Q9HBT7 754 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 BMP2KQ9NSY1 1161 aaPredicted RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 NID2Q14112 1375 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 C4AP0C0L4 1744 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 C4BP0C0L5 1744 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 PDS5AQ29RF7 1337 aaKnown RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 PDE2AO00408 941 aaPredicted RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 KIF11P52732 1056 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 VAV2P52735 878 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 KCNB1Q14721 858 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 KRT79Q5XKE5 535 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 FBXO33Q7Z6M2 555 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 REXO1Q8N1G1 1221 aaKnown RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 MICALL1Q8N3F8 863 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 TRIM58Q8NG06 486 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 DUSP9Q99956 384 aaKnown RBP12.42□□□□□ -0.42
NEFM-201ENST00000221166 LRRC1Q9BTT6 524 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 TSGA10Q9BZW7 698 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 PSD3Q9NYI0 1048 aa12.42□□□□□ -0.42
NEFM-201ENST00000221166 HSF2BPO75031 334 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 LDHCP07864 332 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 KCTD16Q68DU8 428 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 COG1Q8WTW3 980 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 NDST4Q9H3R1 872 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 HPCAL4Q9UM19 191 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 DCCP43146 1447 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 AKAP11Q9UKA4 1901 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
NEFM-201ENST00000221166 GNPATO15228 680 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
NEFM-201ENST00000221166 GRM4Q14833 912 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 CCDC170Q8IYT3 715 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 C4orf32Q8N8J7 132 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 RPGRIP1Q96KN7 1286 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 FAM107BQ9H098 131 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 BARHL2Q9NY43 387 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 EIF3CLB5ME19 914 aaKnown RBP12.41□□□□□ -0.42
NEFM-201ENST00000221166 CCT5P48643 541 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 CCDC155Q8N6L0 562 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 EIF3CQ99613 913 aaKnown RBP12.41□□□□□ -0.42
NEFM-201ENST00000221166 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 CCSER1Q9C0I3 900 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
NEFM-201ENST00000221166 POTEMA6NI47 508 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 STXBP3O00186 592 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 KLRC4O43908 158 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 MYBL2P10244 700 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 NOP2P46087 812 aaKnown RBP12.4□□□□□ -0.42
NEFM-201ENST00000221166 ATP1A2P50993 1020 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 RAPGEF1Q13905 1077 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 HLTFQ14527 1009 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEFM-201ENST00000221166 ZNF507Q8TCN5 953 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 MKRN1Q9UHC7 482 aaKnown RBP12.4□□□□□ -0.42
NEFM-201ENST00000221166 SHTN1A0MZ66 631 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 LRRC53A6NM62 1247 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 CYTH3O43739 400 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 GUCY2FP51841 1108 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 LRRC31Q6UY01 552 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 CCNI2Q6ZMN8 369 aaPredicted RBP12.4□□□□□ -0.42
NEFM-201ENST00000221166 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
NEFM-201ENST00000221166 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.42
NEFM-201ENST00000221166 RETREG2Q8NC44 543 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 HDAC7Q8WUI4 952 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 GJA10Q969M2 543 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 SH3GLB2Q9NR46 395 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 KBTBD4Q9NVX7 518 aa12.4□□□□□ -0.42
NEFM-201ENST00000221166 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms