RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 ZNF18P17022 549 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 PLCG1P19174 1290 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 SMYD4Q8IYR2 804 aaPredicted RBP19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 DPF2Q92785 391 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 KBTBD4Q9NVX7 518 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 SCAF8Q9UPN6 1271 aaKnown RBP19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 MEIS2O14770 477 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 RPN1P04843 607 aaKnown RBP19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 GMPSP49915 693 aaPredicted RBP19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 RASA3Q14644 834 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 FILIP1Q7Z7B0 1213 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 CUEDC2Q9H467 287 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 IMPACTQ9P2X3 320 aa19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 DDX25Q9UHL0 483 aaKnown RBP19.44■□□□□ 0.7
RABGGTA-201ENST00000216840 SMCHD1A6NHR9 2005 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 CBFA2T2O43439 604 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 SERPINC1P01008 464 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 GCFC2P16383 781 aaKnown RBP19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 STAT2P52630 851 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 UBASH3AP57075 661 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 ARID5BQ14865 1188 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 NOLC1Q14978 699 aaKnown RBP eCLIP19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 USH1GQ495M9 461 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 FAM83BQ5T0W9 1011 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 LRRC8AQ8IWT6 810 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 ANO3Q9BYT9 981 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 MAGEF1Q9HAY2 307 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 RMND1Q9NWS8 449 aa19.43■□□□□ 0.7
RABGGTA-201ENST00000216840 FZD9O00144 591 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 MYL1P05976 194 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 TMEM266Q2M3C6 531 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 TEPSINQ96N21 525 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 VCPKMTQ9H867 229 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 LRWD1Q9UFC0 647 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 PSDA5PKW4 1024 aaPredicted RBP19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 AP3B2Q13367 1082 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 PDIA5Q14554 519 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 KLHL10Q6JEL2 608 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 TMC6Q7Z403 805 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 MICALL2Q8IY33 904 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 HAS1Q92839 578 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 NAP1L5Q96NT1 182 aaPredicted RBP19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 P2RX7Q99572 595 aaKnown RBP19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 NAP1L4Q99733 375 aaKnown RBP19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 SPTLC3Q9NUV7 552 aa19.42■□□□□ 0.7
RABGGTA-201ENST00000216840 SYNRGQ9UMZ2 1314 aa19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 PHF20L1A8MW92 1017 aa19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 TAL1P17542 331 aaPredicted RBP19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 USP11P51784 963 aa19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 TNFAIP1Q13829 316 aa19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 ZNF658Q5TYW1 1059 aaPredicted RBP19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 SPATA1Q5VX52 437 aa19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 NLGN2Q8NFZ4 835 aa19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 SAMSN1Q9NSI8 373 aaKnown RBP19.41■□□□□ 0.7
RABGGTA-201ENST00000216840 KLRC4O43908 158 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 ASNSP08243 561 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 STX17P56962 302 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 GSDMDP57764 484 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 HSP90AA4PQ58FG1 418 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 MCTP2Q6DN12 878 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 SAMD7Q7Z3H4 446 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 CALML4Q96GE6 196 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 GLIS2Q9BZE0 524 aaPredicted RBP19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 RAB34Q9BZG1 259 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 SH2D4AQ9H788 454 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 CNOT7Q9UIV1 285 aaKnown RBP19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 OPLAHO14841 1288 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 GRB10Q13322 594 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 KCNB1Q14721 858 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 CRYGNQ8WXF5 182 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 MBOAT7Q96N66 472 aa19.4■□□□□ 0.7
RABGGTA-201ENST00000216840 ASTN2O75129 1339 aaPredicted RBP19.39■□□□□ 0.7
RABGGTA-201ENST00000216840 CYP3A7-CYP3A51PA0A087WV96 503 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 POTEMA6NI47 508 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 CDK11BP21127 795 aaKnown RBP19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 CYP3A7P24462 503 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 ZYXQ15942 572 aaKnown RBP19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 TBC1D10BQ4KMP7 808 aaPredicted RBP19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 CCDC84Q86UT8 332 aaPredicted RBP19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 PNMA5Q96PV4 448 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 INTS13Q9NVM9 706 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 CTNND2Q9UQB3 1225 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 PLA2G6O60733 806 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 KMT5BQ4FZB7 885 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 CHURC1Q8WUH1 139 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 GDAQ9Y2T3 454 aa19.39■□□□□ 0.69
RABGGTA-201ENST00000216840 SEMA3FQ13275 785 aa19.38■□□□□ 0.69
RABGGTA-201ENST00000216840 MOXD1Q6UVY6 613 aa19.38■□□□□ 0.69
RABGGTA-201ENST00000216840 VSTM4Q8IW00 320 aa19.38■□□□□ 0.69
RABGGTA-201ENST00000216840 C7orf25Q9BPX7 421 aa19.38■□□□□ 0.69
RABGGTA-201ENST00000216840 RANBP17Q9H2T7 1088 aaKnown RBP19.38■□□□□ 0.69
RABGGTA-201ENST00000216840 ZNF541Q9H0D2 1346 aa19.38■□□□□ 0.69
RABGGTA-201ENST00000216840 FOSP01100 380 aaPredicted RBP19.37■□□□□ 0.69
RABGGTA-201ENST00000216840 ARHGAP4P98171 946 aa19.37■□□□□ 0.69
RABGGTA-201ENST00000216840 GJA10Q969M2 543 aa19.37■□□□□ 0.69
RABGGTA-201ENST00000216840 NUDT12Q9BQG2 462 aa19.37■□□□□ 0.69
RABGGTA-201ENST00000216840 TRIM9Q9C026 710 aa19.37■□□□□ 0.69
RABGGTA-201ENST00000216840 BLOC1S4Q9NUP1 217 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms