RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 BMP3P12645 472 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 USP14P54578 494 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 NR5A1Q13285 461 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 CCDC96Q2M329 555 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 SCAND2PQ9GZW5 306 aaPredicted RBP12.9□□□□□ -0.34
CDKL1-201ENST00000216378 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
CDKL1-201ENST00000216378 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 OGFRQ9NZT2 677 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 TLR2O60603 784 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
CDKL1-201ENST00000216378 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 C17orf99Q6UX52 265 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 CCAR1Q8IX12 1150 aaKnown RBP12.9□□□□□ -0.34
CDKL1-201ENST00000216378 SMCR8Q8TEV9 937 aaPredicted RBP12.9□□□□□ -0.34
CDKL1-201ENST00000216378 ZNF296Q8WUU4 475 aaPredicted RBP12.9□□□□□ -0.34
CDKL1-201ENST00000216378 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 VPS54Q9P1Q0 977 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 A0A1B0GVL5 298 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L15C9J2P7 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L13C9JLJ4 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L11C9JVI0 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L18D6R9N7 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L22D6RA61 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
CDKL1-201ENST00000216378 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
CDKL1-201ENST00000216378 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
CDKL1-201ENST00000216378 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 PDCL2Q8N4E4 241 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
CDKL1-201ENST00000216378 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
CDKL1-201ENST00000216378 LAMA2P24043 3122 aaKnown RBP12.89□□□□□ -0.35
CDKL1-201ENST00000216378 CCDC172P0C7W6 258 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 BCRP11274 1271 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 INHBEP58166 350 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 REPS2Q8NFH8 660 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 LPAR1Q92633 364 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
CDKL1-201ENST00000216378 GMCL1Q96IK5 515 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 PRR12Q9ULL5 1215 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 PCDHA7Q9UN72 937 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 MYH15Q9Y2K3 1946 aa12.89□□□□□ -0.35
CDKL1-201ENST00000216378 GPR25O00155 361 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 VWA5AO00534 786 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 PPP1R11O60927 126 aaPredicted RBP12.88□□□□□ -0.35
CDKL1-201ENST00000216378 DSG3P32926 999 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 SEMA3FQ13275 785 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 COG2Q14746 738 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 ZNF536O15090 1300 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
CDKL1-201ENST00000216378 IKQ13123 557 aaPredicted RBP12.88□□□□□ -0.35
CDKL1-201ENST00000216378 STK38Q15208 465 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 SRBD1Q8N5C6 995 aaKnown RBP12.88□□□□□ -0.35
CDKL1-201ENST00000216378 CD99L2Q8TCZ2 262 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 TSC1Q92574 1164 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
CDKL1-201ENST00000216378 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
CDKL1-201ENST00000216378 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
CDKL1-201ENST00000216378 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
CDKL1-201ENST00000216378 PLS1Q14651 629 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
CDKL1-201ENST00000216378 EARS2Q5JPH6 523 aaKnown RBP12.87□□□□□ -0.35
CDKL1-201ENST00000216378 CPLX2Q6PUV4 134 aaKnown RBP12.87□□□□□ -0.35
CDKL1-201ENST00000216378 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 ADGRF4Q8IZF3 695 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
CDKL1-201ENST00000216378 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 TNMDQ9H2S6 317 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 SH2D4AQ9H788 454 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 ADAMTS5Q9UNA0 930 aa12.87□□□□□ -0.35
CDKL1-201ENST00000216378 KLRF2D3W0D1 207 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 CDKL5O76039 1030 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 IFNAR1P17181 557 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDKL1-201ENST00000216378 STAT2P52630 851 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 GTF2A1P52655 376 aaPredicted RBP12.86□□□□□ -0.35
CDKL1-201ENST00000216378 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 ANKRD7Q92527 254 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
CDKL1-201ENST00000216378 JMJD4Q9H9V9 463 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 ZFYVE28Q9HCC9 887 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 ELP1O95163 1332 aa12.86□□□□□ -0.35
CDKL1-201ENST00000216378 WNT7AO00755 349 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms