RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 MORN1Q5T089 497 aa23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 BICD2Q8TD16 824 aa23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 INTS4Q96HW7 963 aaKnown RBP23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 PRDM10Q9NQV6 1147 aa23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 CYP39A1Q9NYL5 469 aa23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 ESYT2A0FGR8 921 aa23.2■■□□□ 1.3
RHBDD3-201ENST00000216085 SMCO2A6NFE2 343 aa23.2■■□□□ 1.3
RHBDD3-201ENST00000216085 POTEB2H3BUK9 544 aa23.2■■□□□ 1.3
RHBDD3-201ENST00000216085 VPS54Q9P1Q0 977 aa23.2■■□□□ 1.3
RHBDD3-201ENST00000216085 CALML3P27482 149 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 NLRP5P59047 1200 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 RPS6P62753 249 aaKnown RBP23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 BAATQ14032 418 aaPredicted RBP23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 MPHOSPH6Q99547 160 aaKnown RBP23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 APBA2Q99767 749 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 ADD3Q9UEY8 706 aaKnown RBP23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 FDPSP14324 419 aaKnown RBP23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 GHRHRQ02643 423 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 PRKCZQ05513 592 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 GALNT17Q6IS24 598 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 OTOP1Q7RTM1 612 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 CTU1Q7Z7A3 348 aaKnown RBP23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 RAET1EQ8TD07 263 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 ZMYND12Q9H0C1 365 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 RIC8AQ9NPQ8 531 aa23.19■■□□□ 1.3
RHBDD3-201ENST00000216085 FLT3LGP49771 235 aa23.18■■□□□ 1.3
RHBDD3-201ENST00000216085 HSD17B4P51659 736 aa23.18■■□□□ 1.3
RHBDD3-201ENST00000216085 SLC30A10Q6XR72 485 aa23.18■■□□□ 1.3
RHBDD3-201ENST00000216085 BRMS1Q9HCU9 246 aa23.18■■□□□ 1.3
RHBDD3-201ENST00000216085 DIS3Q9Y2L1 958 aaKnown RBP23.18■■□□□ 1.3
RHBDD3-201ENST00000216085 SMCHD1A6NHR9 2005 aa23.18■■□□□ 1.3
RHBDD3-201ENST00000216085 CASP8AP2Q9UKL3 1982 aa23.18■■□□□ 1.3
RHBDD3-201ENST00000216085 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 B4DLN1 442 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 PIK3CDO00329 1044 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 PGK2P07205 417 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 HOXC6P09630 235 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 MCTP2Q6DN12 878 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 TYW1BQ6NUM6 668 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 TRMT44Q8IYL2 757 aaKnown RBP23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 GJD2Q9UKL4 321 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 OPLAHO14841 1288 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 XRCC5P13010 732 aaKnown RBP23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 GJB2P29033 226 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 IRF5Q13568 498 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 C8orf76Q96K31 380 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 AIFM3Q96NN9 605 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 EHMT1Q9H9B1 1298 aa23.17■■□□□ 1.3
RHBDD3-201ENST00000216085 DNAJC25-GNG10A0A024R161 153 aa23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 SPDYE3A6NKU9 549 aa23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 CYP2B6P20813 491 aa23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 PKN2Q16513 984 aaKnown RBP23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 REXO1Q8N1G1 1221 aaKnown RBP23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 DNERQ8NFT8 737 aa23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 SYTL5Q8TDW5 730 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 USP6NLQ92738 828 aa23.16■■□□□ 1.3
RHBDD3-201ENST00000216085 DTNBO60941 627 aa23.15■■□□□ 1.3
RHBDD3-201ENST00000216085 HOXA13P31271 388 aaPredicted RBP23.15■■□□□ 1.3
RHBDD3-201ENST00000216085 SAFBQ15424 915 aaKnown RBP eCLIP23.15■■□□□ 1.3
RHBDD3-201ENST00000216085 FAM133AQ8N9E0 248 aa23.15■■□□□ 1.3
RHBDD3-201ENST00000216085 GABRQQ9UN88 632 aa23.15■■□□□ 1.3
RHBDD3-201ENST00000216085 LOC102724159A0A0B4J2E5 919 aa23.14■■□□□ 1.3
RHBDD3-201ENST00000216085 PDCP20941 246 aa23.14■■□□□ 1.3
RHBDD3-201ENST00000216085 PWP2Q15269 919 aaKnown RBP23.14■■□□□ 1.3
RHBDD3-201ENST00000216085 ZNF792Q3KQV3 632 aa23.14■■□□□ 1.3
RHBDD3-201ENST00000216085 ZNF467Q7Z7K2 595 aaPredicted RBP23.14■■□□□ 1.3
RHBDD3-201ENST00000216085 PCDHA4Q9UN74 947 aa23.14■■□□□ 1.3
RHBDD3-201ENST00000216085 DOCK3Q8IZD9 2030 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 MEIS2O14770 477 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 COBLO75128 1261 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 FOSP01100 380 aaPredicted RBP23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 CAP1Q01518 475 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 AP3B2Q13367 1082 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 USP17L6PQ6QN14 398 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 FCHSD1Q86WN1 690 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 MSL3Q8N5Y2 521 aaKnown RBP23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 NSUN6Q8TEA1 469 aaKnown RBP23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 TBC1D5Q92609 795 aa23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 DAXXQ9UER7 740 aaPredicted RBP23.14■■□□□ 1.29
RHBDD3-201ENST00000216085 ARHGEF16Q5VV41 709 aa23.13■■□□□ 1.29
RHBDD3-201ENST00000216085 DAGLBQ8NCG7 672 aa23.13■■□□□ 1.29
RHBDD3-201ENST00000216085 SLAIN1Q8ND83 568 aa23.13■■□□□ 1.29
RHBDD3-201ENST00000216085 MAML3Q96JK9 1138 aa23.13■■□□□ 1.29
RHBDD3-201ENST00000216085 RMDN3Q96TC7 470 aa23.13■■□□□ 1.29
RHBDD3-201ENST00000216085 PHF20Q9BVI0 1012 aa23.13■■□□□ 1.29
RHBDD3-201ENST00000216085 PTPN22Q9Y2R2 807 aa23.13■■□□□ 1.29
RHBDD3-201ENST00000216085 ASB14A6NK59 587 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 FOSBP53539 338 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 CNTN2Q02246 1040 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 UBE2SQ16763 222 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 OLFML2BQ68BL8 750 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 BLIDQ8IZY5 108 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 KCNJ14Q9UNX9 436 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 ZNFX1Q9P2E3 1918 aaKnown RBP23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 H3BQV1 296 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 KRT40Q6A162 431 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 PXYLP1Q8TE99 480 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 FOXD4L1Q9NU39 408 aa23.12■■□□□ 1.29
RHBDD3-201ENST00000216085 ADCY3O60266 1144 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms