RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 CUL5Q93034 780 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 SPAG5Q96R06 1193 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 NUP58Q9BVL2 599 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 STK36Q9NRP7 1315 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 SMNDC1O75940 238 aaKnown RBP eCLIP16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 MMP1P03956 469 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 IFNAR1P17181 557 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 ELF3P78545 371 aaPredicted RBP16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 NR5A1Q13285 461 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 RTN1Q16799 776 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 NUP133Q8WUM0 1156 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 CCDC47Q96A33 483 aaKnown RBP16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 PLCD4Q9BRC7 762 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 KRT23Q9C075 422 aa16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 PPANQ9NQ55 473 aaKnown RBP16.46■□□□□ 0.23
TMEM38A-201ENST00000187762 ANO9A1A5B4 782 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 TTC36A6NLP5 189 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 CD44P16070 742 aaKnown RBP16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 PRPHP41219 470 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 CUL4BQ13620 913 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 WTAPQ15007 396 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 LACTB2Q53H82 288 aaPredicted RBP16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 ADGRA1Q86SQ6 560 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 SDR42E1Q8WUS8 393 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 CNNM2Q9H8M5 875 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 JADE2Q9NQC1 790 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 BAIAP2L1Q9UHR4 511 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 C15orf41Q9Y2V0 281 aa16.46■□□□□ 0.22
TMEM38A-201ENST00000187762 PHLPP1O60346 1717 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 WTIPA6NIX2 430 aaPredicted RBP16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 DNAJC8O75937 253 aaPredicted RBP16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 TRIM14Q14142 442 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 FKBP15Q5T1M5 1219 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 CFAP58Q5T655 872 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 PPP4R3AQ6IN85 833 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 INTS5Q6P9B9 1019 aaKnown RBP16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 TAX1BP1Q86VP1 789 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 IQCKQ8N0W5 287 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 MYH6P13533 1939 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 IDEP14735 1019 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 THEMIS2Q5TEJ8 643 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 SPATA20Q8TB22 786 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 OXER1Q8TDS5 423 aa16.45■□□□□ 0.22
TMEM38A-201ENST00000187762 N4BP3O15049 544 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 ATP2C2O75185 946 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 PPARAQ07869 468 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 CREG2Q8IUH2 290 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 C3orf20Q8ND61 904 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 TCP11Q8WWU5 503 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 ATP6V1G3Q96LB4 118 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 STIM2Q9P246 746 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 TAF1P21675 1872 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 MINDY4BA8MYZ0 360 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 KRT86O43790 486 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 TNFRSF8P28908 595 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 ITGB3BPQ13352 177 aaPredicted RBP16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 PDCD2Q16342 344 aaPredicted RBP16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 NACAP1Q9BZK3 213 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
TMEM38A-201ENST00000187762 GMNCA6NCL1 334 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 ITIH3Q06033 890 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 CHRNDQ07001 517 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 KRT31Q15323 416 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 QPCTQ16769 361 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 GLE1Q53GS7 698 aaKnown RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 CCDC181Q5TID7 509 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 ZNF572Q7Z3I7 529 aaPredicted RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 CD302Q8IX05 232 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 MYH2Q9UKX2 1941 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 MYH14Q7Z406 1995 aaKnown RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 ACTN4O43707 911 aaKnown RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 PSMD2Q13200 908 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 SAFBQ15424 915 aaKnown RBP eCLIP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 HAUS3Q68CZ6 603 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 CRELD2Q6UXH1 353 aaPredicted RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 ZNF662Q6ZS27 426 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 TRIM22Q8IYM9 498 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 FNBP4Q8N3X1 1017 aaPredicted RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 SPATA4Q8NEY3 305 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 SEC16BQ96JE7 1060 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 YIPF3Q9GZM5 350 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 CORO1CQ9ULV4 474 aaPredicted RBP16.43■□□□□ 0.22
TMEM38A-201ENST00000187762 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
TMEM38A-201ENST00000187762 BAZ2AQ9UIF9 1905 aaKnown RBP16.42■□□□□ 0.22
TMEM38A-201ENST00000187762 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
TMEM38A-201ENST00000187762 ERICH2A1L162 156 aa16.42■□□□□ 0.22
TMEM38A-201ENST00000187762 HMGB1P1B2RPK0 211 aaPredicted RBP16.42■□□□□ 0.22
TMEM38A-201ENST00000187762 ANP32DO95626 131 aa16.42■□□□□ 0.22
TMEM38A-201ENST00000187762 CYP7A1P22680 504 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms