RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 MAML3Q96JK9 1138 aa12.2□□□□□ -0.46
MRPS35-201ENST00000081029 FAM217BQ9NTX9 383 aaPredicted RBP12.2□□□□□ -0.46
MRPS35-201ENST00000081029 CYP39A1Q9NYL5 469 aa12.2□□□□□ -0.46
MRPS35-201ENST00000081029 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
MRPS35-201ENST00000081029 MRPL11Q9Y3B7 192 aaKnown RBP12.2□□□□□ -0.46
MRPS35-201ENST00000081029 ABCB11O95342 1321 aa12.2□□□□□ -0.46
MRPS35-201ENST00000081029 CPLX1O14810 134 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 HOXC6P09630 235 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
MRPS35-201ENST00000081029 SMARCA1P28370 1054 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 ZNF792Q3KQV3 632 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
MRPS35-201ENST00000081029 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 TMEM106CQ9BVX2 250 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 PFASO15067 1338 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 DTNBO60941 627 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 CCL5P13501 91 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 SOX10P56693 466 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 EVCP57679 992 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 RPS6P62753 249 aaKnown RBP12.19□□□□□ -0.46
MRPS35-201ENST00000081029 CACNB2Q08289 660 aaPredicted RBP12.19□□□□□ -0.46
MRPS35-201ENST00000081029 SLC30A10Q6XR72 485 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 PHKBQ93100 1093 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 ZNF274Q96GC6 653 aaPredicted RBP12.19□□□□□ -0.46
MRPS35-201ENST00000081029 SMC3Q9UQE7 1217 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
MRPS35-201ENST00000081029 HTTP42858 3142 aa12.19□□□□□ -0.46
MRPS35-201ENST00000081029 DNAJC25-GNG10A0A024R161 153 aa12.18□□□□□ -0.46
MRPS35-201ENST00000081029 PFKFB2O60825 505 aa12.18□□□□□ -0.46
MRPS35-201ENST00000081029 HOXA13P31271 388 aaPredicted RBP12.18□□□□□ -0.46
MRPS35-201ENST00000081029 RCAN1P53805 252 aa12.18□□□□□ -0.46
MRPS35-201ENST00000081029 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
MRPS35-201ENST00000081029 TRAF1Q13077 416 aa12.18□□□□□ -0.46
MRPS35-201ENST00000081029 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
MRPS35-201ENST00000081029 MCF2L2Q86YR7 1114 aa12.18□□□□□ -0.46
MRPS35-201ENST00000081029 GPKOWQ92917 476 aaPredicted RBP eCLIP12.18□□□□□ -0.461e-7■■■□□ 17.3
MRPS35-201ENST00000081029 TINF2Q9BSI4 451 aa12.18□□□□□ -0.46
MRPS35-201ENST00000081029 HMX1Q9NP08 348 aaPredicted RBP12.18□□□□□ -0.46
MRPS35-201ENST00000081029 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
MRPS35-201ENST00000081029 CCND3P30281 292 aaPredicted RBP12.17□□□□□ -0.46
MRPS35-201ENST00000081029 OLFML2BQ68BL8 750 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 EEPD1Q7L9B9 569 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 DIS3Q9Y2L1 958 aaKnown RBP12.17□□□□□ -0.46
MRPS35-201ENST00000081029 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 FAM133AQ8N9E0 248 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 DEFB118Q96PH6 123 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 CNPY2Q9Y2B0 182 aa12.17□□□□□ -0.46
MRPS35-201ENST00000081029 RPTORQ8N122 1335 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 BRD1O95696 1058 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
MRPS35-201ENST00000081029 GJB2P29033 226 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 MCM4P33991 863 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 FUT2Q10981 343 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 SCRN1Q12765 414 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 ANO1Q5XXA6 986 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 CPLX2Q6PUV4 134 aaKnown RBP12.16□□□□□ -0.46
MRPS35-201ENST00000081029 CLEC17AQ6ZS10 378 aa12.16□□□□□ -0.46
MRPS35-201ENST00000081029 ADD3Q9UEY8 706 aaKnown RBP12.16□□□□□ -0.46
MRPS35-201ENST00000081029 ZHX1Q9UKY1 873 aaPredicted RBP12.16□□□□□ -0.46
MRPS35-201ENST00000081029 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 GCOM1H8Y6P7 765 aaPredicted RBP12.15□□□□□ -0.46
MRPS35-201ENST00000081029 OPLAHO14841 1288 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 TFRCP02786 760 aaKnown RBP12.15□□□□□ -0.46
MRPS35-201ENST00000081029 POLR2MP0CAP2 368 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 NAPAP54920 295 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.46
MRPS35-201ENST00000081029 WWC2Q6AWC2 1192 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
MRPS35-201ENST00000081029 ARMCX2Q7L311 632 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 TRIM22Q8IYM9 498 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
MRPS35-201ENST00000081029 TAAR1Q96RJ0 339 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.46
MRPS35-201ENST00000081029 PSTPIP2Q9H939 334 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
MRPS35-201ENST00000081029 ASB14A6NK59 587 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 SNAI1O95863 264 aaPredicted RBP12.14□□□□□ -0.47
MRPS35-201ENST00000081029 EN2P19622 333 aaPredicted RBP12.14□□□□□ -0.47
MRPS35-201ENST00000081029 SYT1P21579 422 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 NTRK3Q16288 839 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 ARHGEF16Q5VV41 709 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 USP17L6PQ6QN14 398 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 RGS22Q8NE09 1264 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 TRPV1Q8NER1 839 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 CUL5Q93034 780 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 FGD4Q96M96 766 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
MRPS35-201ENST00000081029 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.14□□□□□ -0.47
MRPS35-201ENST00000081029 COL20A1Q9P218 1284 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 ASTN1O14525 1302 aa12.14□□□□□ -0.47
MRPS35-201ENST00000081029 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms