RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 CROCC2H7BZ55 1655 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 KIAA0754O94854 1291 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 STAT3P40763 770 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 NLRP12P59046 1061 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 KIAA1841Q6NSI8 718 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 PPM1KQ8N3J5 372 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 LRFN2Q9ULH4 789 aa12.59□□□□□ -0.39
PKP2-201ENST00000070846 RPAP1Q9BWH6 1393 aaPredicted RBP12.59□□□□□ -0.39
PKP2-201ENST00000070846 CPS1P31327 1500 aa12.58□□□□□ -0.39
PKP2-201ENST00000070846 CTAGE9A4FU28 777 aa12.58□□□□□ -0.39
PKP2-201ENST00000070846 GSG1L2A8MUP6 293 aa12.58□□□□□ -0.39
PKP2-201ENST00000070846 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.39
PKP2-201ENST00000070846 MRPS9P82933 396 aaKnown RBP12.58□□□□□ -0.39
PKP2-201ENST00000070846 CCDC125Q86Z20 511 aa12.58□□□□□ -0.39
PKP2-201ENST00000070846 LARP4BQ92615 738 aaKnown RBP12.58□□□□□ -0.39
PKP2-201ENST00000070846 JAKMIP2Q96AA8 810 aa12.58□□□□□ -0.39
PKP2-201ENST00000070846 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.39
PKP2-201ENST00000070846 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.58□□□□□ -0.39
PKP2-201ENST00000070846 RSBN1LQ6PCB5 846 aaPredicted RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 STAG1Q8WVM7 1258 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 NLRP4Q96MN2 994 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 NACC1Q96RE7 527 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 CSRNP2Q9H175 543 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 SUGT1Q9Y2Z0 365 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 PRPF3O43395 683 aaKnown RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 ZSCAN20P17040 1043 aaPredicted RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 ADAM9Q13443 819 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 INTS5Q6P9B9 1019 aaKnown RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 TMED8Q6PL24 325 aaPredicted RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 NLRP7Q8WX94 980 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 GJB4Q9NTQ9 266 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 PIK3C2BO00750 1634 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 ZBTB5O15062 677 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 HOXD10P28358 340 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 MAGEA1P43355 309 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 RNASE9P60153 205 aaKnown RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 MAP2K1Q02750 393 aaPredicted RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 RCSD1Q6JBY9 416 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 ENAHQ8N8S7 591 aaPredicted RBP12.58□□□□□ -0.4
PKP2-201ENST00000070846 PPP1R14CQ8TAE6 165 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 PLA2G12BQ9BX93 195 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 DEFB129Q9H1M3 183 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
PKP2-201ENST00000070846 hCG_1984214I3L0E3 225 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 LMNB1P20700 586 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 STXBP2Q15833 593 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 C9orf131Q5VYM1 1079 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 RRAGAQ7L523 313 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 ZNF713Q8N859 430 aaPredicted RBP12.57□□□□□ -0.4
PKP2-201ENST00000070846 GOLGA5Q8TBA6 731 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 CCDC114Q96M63 670 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 MED10Q9BTT4 135 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
PKP2-201ENST00000070846 CBX8Q9HC52 389 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 HESX1Q9UBX0 185 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 MTUS1Q9ULD2 1270 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 OSTNP61366 133 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 SLC39A14Q15043 492 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 KMT5AQ9NQR1 393 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 C1orf112Q9NSG2 853 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 CSF1RP07333 972 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 STAT1P42224 750 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 FASTKD5Q7L8L6 764 aaKnown RBP12.57□□□□□ -0.4
PKP2-201ENST00000070846 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 NSUN6Q8TEA1 469 aaKnown RBP12.57□□□□□ -0.4
PKP2-201ENST00000070846 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
PKP2-201ENST00000070846 FBXO41Q8TF61 875 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 DCAF4Q8WV16 495 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 CWC15Q9P013 229 aaKnown RBP12.57□□□□□ -0.4
PKP2-201ENST00000070846 TXNDC16Q9P2K2 825 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
PKP2-201ENST00000070846 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
PKP2-201ENST00000070846 MMP1P03956 469 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 KIF23Q02241 960 aaPredicted RBP12.56□□□□□ -0.4
PKP2-201ENST00000070846 KRBA2Q6ZNG9 492 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 TMTC3Q6ZXV5 915 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 EXOC8Q8IYI6 725 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
PKP2-201ENST00000070846 FTOQ9C0B1 505 aaKnown RBP eCLIP12.56□□□□□ -0.4
PKP2-201ENST00000070846 TRPM1Q7Z4N2 1603 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 CAPN9O14815 690 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 NDUFA8P51970 172 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 MTMR2Q13614 643 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
PKP2-201ENST00000070846 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 ZBED2Q9BTP6 218 aa12.56□□□□□ -0.4
PKP2-201ENST00000070846 IQCGQ9H095 443 aaKnown RBP12.56□□□□□ -0.4
PKP2-201ENST00000070846 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
PKP2-201ENST00000070846 STIM2Q9P246 746 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms