RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 PCDHB6Q9Y5E3 794 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 SMCHD1A6NHR9 2005 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 CFBP00751 764 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 UBXN2AP68543 259 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 ANKRD13AQ8IZ07 590 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 TBC1D5Q92609 795 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 AGBL1Q96MI9 1066 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 GOLPH3LQ9H4A5 285 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
CD4-201ENST00000011653 NID2Q14112 1375 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 ALAS1P13196 640 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 CCDC144BQ3MJ40 725 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 FSIP1Q8NA03 581 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 CCDC148Q8NFR7 591 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 CHURC1Q8WUH1 139 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 OPTNQ96CV9 577 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 ATG4CQ96DT6 458 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 C6orf50Q9HD87 102 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 ZNF112Q9UJU3 913 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 PAXBP1Q9Y5B6 917 aa11.97□□□□□ -0.49
CD4-201ENST00000011653 CEP57L1Q8IYX8 460 aa11.96□□□□□ -0.49
CD4-201ENST00000011653 KIAA1683Q9H0B3 1180 aa11.96□□□□□ -0.49
CD4-201ENST00000011653 SNW1Q13573 536 aaKnown RBP11.96□□□□□ -0.5
CD4-201ENST00000011653 ZRSR1Q15695 479 aaKnown RBP11.96□□□□□ -0.5
CD4-201ENST00000011653 LETM2Q2VYF4 491 aa11.96□□□□□ -0.5
CD4-201ENST00000011653 TREML2Q5T2D2 321 aa11.96□□□□□ -0.5
CD4-201ENST00000011653 BRAPQ7Z569 592 aa11.96□□□□□ -0.5
CD4-201ENST00000011653 PAGR1Q9BTK6 254 aa11.96□□□□□ -0.5
CD4-201ENST00000011653 AMNQ9BXJ7 453 aa11.96□□□□□ -0.5
CD4-201ENST00000011653 NAT10Q9H0A0 1025 aaKnown RBP11.96□□□□□ -0.5
CD4-201ENST00000011653 PSTPIP2Q9H939 334 aa11.96□□□□□ -0.5
CD4-201ENST00000011653 PCDHA4Q9UN74 947 aa11.96□□□□□ -0.5
CD4-201ENST00000011653 ADCY7P51828 1080 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 SYCP1Q15431 976 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 NPY5RQ15761 445 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 WDR78Q5VTH9 848 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 ANO1Q5XXA6 986 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 LRRC8AQ8IWT6 810 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 REXO1Q8N1G1 1221 aaKnown RBP11.95□□□□□ -0.5
CD4-201ENST00000011653 CLIC6Q96NY7 704 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 CCPG1Q9ULG6 757 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 CALML3P27482 149 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 TOB1P50616 345 aaPredicted RBP11.95□□□□□ -0.5
CD4-201ENST00000011653 LDHDQ86WU2 507 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 CCDC112Q8NEF3 446 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 ENGASEQ8NFI3 743 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 CCDC12Q8WUD4 166 aaPredicted RBP11.95□□□□□ -0.5
CD4-201ENST00000011653 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 GBA2Q9HCG7 927 aaPredicted RBP11.95□□□□□ -0.5
CD4-201ENST00000011653 MYH15Q9Y2K3 1946 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.5
CD4-201ENST00000011653 USP14P54578 494 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 CBX1P83916 185 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 MRPS27Q92552 414 aaKnown RBP11.95□□□□□ -0.5
CD4-201ENST00000011653 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
CD4-201ENST00000011653 CENPFP49454 3210 aa11.95□□□□□ -0.5
CD4-201ENST00000011653 WDR46O15213 610 aaKnown RBP11.94□□□□□ -0.5
CD4-201ENST00000011653 GNA11P29992 359 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 C2orf69Q8N8R5 385 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 FOXP1Q9H334 677 aaPredicted RBP11.94□□□□□ -0.5
CD4-201ENST00000011653 PCDHA6Q9UN73 950 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 AFG3L2Q9Y4W6 797 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 PCDHA8Q9Y5H6 950 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 SPTLC2O15270 562 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 HUNKP57058 714 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
CD4-201ENST00000011653 DHX40Q8IX18 779 aaKnown RBP11.94□□□□□ -0.5
CD4-201ENST00000011653 PRPF38AQ8NAV1 312 aaKnown RBP11.94□□□□□ -0.5
CD4-201ENST00000011653 A0A1B0GVL5 298 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
CD4-201ENST00000011653 NCBP1Q09161 790 aaKnown RBP11.93□□□□□ -0.5
CD4-201ENST00000011653 CEP135Q66GS9 1140 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 ERO1BQ86YB8 467 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 GJA10Q969M2 543 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 RTEL1Q9NZ71 1219 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 FEM1BQ9UK73 627 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 GRIN1Q05586 938 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 TTC38Q5R3I4 469 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 AOPEPQ8N6M6 819 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 LPAR1Q92633 364 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 CUL5Q93034 780 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 A0A1W2PQ27 194 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 A0A1W2PQ64 194 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 A0A1W2PQD8 194 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
CD4-201ENST00000011653 SKILP12757 684 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 CDC25AP30304 524 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
CD4-201ENST00000011653 ADALQ6DHV7 355 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 FILIP1Q7Z7B0 1213 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 PDILTQ8N807 584 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 LINC00301Q8NCQ3 95 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
CD4-201ENST00000011653 WDR18Q9BV38 432 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 ZMYND12Q9H0C1 365 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 TMEM51Q9NW97 253 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 PCDHA7Q9UN72 937 aa11.93□□□□□ -0.5
CD4-201ENST00000011653 MARCH6O60337 910 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms