RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 TRIM60Q495X7 471 aa29.02■■■□□ 2.24
TSR3-201ENST00000007390 IQSEC1Q6DN90 963 aa29.02■■■□□ 2.24
TSR3-201ENST00000007390 CASC1Q6TDU7 716 aa29.02■■■□□ 2.24
TSR3-201ENST00000007390 PCSK9Q8NBP7 692 aaKnown RBP29.02■■■□□ 2.24
TSR3-201ENST00000007390 NUP133Q8WUM0 1156 aa29.02■■■□□ 2.24
TSR3-201ENST00000007390 VAT1LQ9HCJ6 419 aa29.02■■■□□ 2.24
TSR3-201ENST00000007390 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.01■■■□□ 2.23
TSR3-201ENST00000007390 EDNRBP24530 442 aa29.01■■■□□ 2.23
TSR3-201ENST00000007390 KCNA10Q16322 511 aa29.01■■■□□ 2.23
TSR3-201ENST00000007390 CATIPQ7Z7H3 387 aa29.01■■■□□ 2.23
TSR3-201ENST00000007390 MPHOSPH6Q99547 160 aaKnown RBP29.01■■■□□ 2.23
TSR3-201ENST00000007390 MRPL11Q9Y3B7 192 aaKnown RBP29.01■■■□□ 2.23
TSR3-201ENST00000007390 CTAGE5O15320 804 aa29■■■□□ 2.23
TSR3-201ENST00000007390 PRC1O43663 620 aa29■■■□□ 2.23
TSR3-201ENST00000007390 NEFLP07196 543 aa29■■■□□ 2.23
TSR3-201ENST00000007390 MCM5P33992 734 aa29■■■□□ 2.23
TSR3-201ENST00000007390 EEPD1Q7L9B9 569 aa29■■■□□ 2.23
TSR3-201ENST00000007390 MCF2L2Q86YR7 1114 aa29■■■□□ 2.23
TSR3-201ENST00000007390 AMNQ9BXJ7 453 aa29■■■□□ 2.23
TSR3-201ENST00000007390 LY9Q9HBG7 655 aa29■■■□□ 2.23
TSR3-201ENST00000007390 PDGFCQ9NRA1 345 aa29■■■□□ 2.23
TSR3-201ENST00000007390 ZBTB5O15062 677 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 SMPD1P17405 629 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 IRX5P78411 483 aaPredicted RBP28.99■■■□□ 2.23
TSR3-201ENST00000007390 SLC35G1Q2M3R5 365 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 GNASQ5JWF2 1037 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 MAP3K14Q99558 947 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 RIOX1Q9H6W3 641 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 STARD7Q9NQZ5 370 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 PRKAG2Q9UGJ0 569 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 Q9Y3F1 56 aa28.99■■■□□ 2.23
TSR3-201ENST00000007390 RNF20Q5VTR2 975 aa28.98■■■□□ 2.23
TSR3-201ENST00000007390 NOL8Q76FK4 1167 aaKnown RBP28.98■■■□□ 2.23
TSR3-201ENST00000007390 TLK2Q86UE8 772 aa28.98■■■□□ 2.23
TSR3-201ENST00000007390 TMEM87BQ96K49 555 aa28.98■■■□□ 2.23
TSR3-201ENST00000007390 LAMA3Q16787 3333 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 ELP1O95163 1332 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 RBM47A0AV96 593 aaKnown RBP28.97■■■□□ 2.23
TSR3-201ENST00000007390 B4DLN1 442 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 PPP1R11O60927 126 aaPredicted RBP28.97■■■□□ 2.23
TSR3-201ENST00000007390 DDAH1O94760 285 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 ASGR1P07306 291 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 MRPL12P52815 198 aaKnown RBP28.97■■■□□ 2.23
TSR3-201ENST00000007390 GHRHRQ02643 423 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 TLE2Q04725 743 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 PDE4DQ08499 809 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 TMTC2Q8N394 836 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 SYTL5Q8TDW5 730 aaPredicted RBP28.97■■■□□ 2.23
TSR3-201ENST00000007390 TBC1D5Q92609 795 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 GLT1D1Q96MS3 346 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 PDLIM7Q9NR12 457 aa28.97■■■□□ 2.23
TSR3-201ENST00000007390 SH2B2O14492 632 aaPredicted RBP28.96■■■□□ 2.23
TSR3-201ENST00000007390 TRAF1Q13077 416 aa28.96■■■□□ 2.23
TSR3-201ENST00000007390 ZNF654Q8IZM8 581 aa28.96■■■□□ 2.23
TSR3-201ENST00000007390 AP5M1Q9H0R1 490 aa28.96■■■□□ 2.23
TSR3-201ENST00000007390 GPHNQ9NQX3 736 aaPredicted RBP28.96■■■□□ 2.23
TSR3-201ENST00000007390 MYH6P13533 1939 aa28.95■■■□□ 2.23
TSR3-201ENST00000007390 CYTH3O43739 400 aa28.95■■■□□ 2.22
TSR3-201ENST00000007390 LIFRP42702 1097 aa28.95■■■□□ 2.22
TSR3-201ENST00000007390 COL9A3Q14050 684 aaPredicted RBP28.95■■■□□ 2.22
TSR3-201ENST00000007390 FSCN1Q16658 493 aaKnown RBP28.95■■■□□ 2.22
TSR3-201ENST00000007390 DUSP28Q4G0W2 176 aa28.95■■■□□ 2.22
TSR3-201ENST00000007390 ANKRD33Q7Z3H0 272 aa28.95■■■□□ 2.22
TSR3-201ENST00000007390 TOX2Q96NM4 488 aa28.95■■■□□ 2.22
TSR3-201ENST00000007390 LBHD1Q9BQE6 289 aaPredicted RBP28.95■■■□□ 2.22
TSR3-201ENST00000007390 UBE2OQ9C0C9 1292 aaKnown RBP28.95■■■□□ 2.22
TSR3-201ENST00000007390 OPLAHO14841 1288 aa28.94■■■□□ 2.22
TSR3-201ENST00000007390 PIGSQ96S52 555 aa28.94■■■□□ 2.22
TSR3-201ENST00000007390 WDR11Q9BZH6 1224 aa28.94■■■□□ 2.22
TSR3-201ENST00000007390 COL20A1Q9P218 1284 aa28.94■■■□□ 2.22
TSR3-201ENST00000007390 PCDHA1Q9Y5I3 950 aa28.94■■■□□ 2.22
TSR3-201ENST00000007390 DYNC1LI2O43237 492 aaPredicted RBP28.93■■■□□ 2.22
TSR3-201ENST00000007390 KIF5BP33176 963 aa28.93■■■□□ 2.22
TSR3-201ENST00000007390 HSD17B4P51659 736 aa28.93■■■□□ 2.22
TSR3-201ENST00000007390 MDM2Q00987 491 aaPredicted RBP28.93■■■□□ 2.22
TSR3-201ENST00000007390 BEX3Q00994 111 aa28.93■■■□□ 2.22
TSR3-201ENST00000007390 TSGA10IPQ3SY00 556 aa28.93■■■□□ 2.22
TSR3-201ENST00000007390 TMEM63BQ5T3F8 832 aa28.93■■■□□ 2.22
TSR3-201ENST00000007390 HOMER1Q86YM7 354 aa28.93■■■□□ 2.22
TSR3-201ENST00000007390 CTCFLQ8NI51 663 aaPredicted RBP28.93■■■□□ 2.22
TSR3-201ENST00000007390 NSUN6Q8TEA1 469 aaKnown RBP28.93■■■□□ 2.22
TSR3-201ENST00000007390 MAP3K20Q9NYL2 800 aaKnown RBP28.93■■■□□ 2.22
TSR3-201ENST00000007390 PCDH10Q9P2E7 1040 aa28.93■■■□□ 2.22
TSR3-201ENST00000007390 LTBP2Q14767 1821 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 CABYRO75952 493 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 CLTBP09497 229 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 TDHQ8IZJ6 230 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 SAMD3Q8N6K7 520 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 SCFD2Q8WU76 684 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 TAAR1Q96RJ0 339 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 IWS1Q96ST2 819 aa28.92■■■□□ 2.22
TSR3-201ENST00000007390 PRDM5Q9NQX1 630 aaPredicted RBP28.92■■■□□ 2.22
TSR3-201ENST00000007390 PNMA6FA0A0J9YX94 578 aa28.91■■■□□ 2.22
TSR3-201ENST00000007390 A0A0U1RQG5 324 aaPredicted RBP28.91■■■□□ 2.22
TSR3-201ENST00000007390 PQBP1O60828 265 aaKnown RBP28.91■■■□□ 2.22
TSR3-201ENST00000007390 PTGS1P23219 599 aa28.91■■■□□ 2.22
TSR3-201ENST00000007390 SMARCA1P28370 1054 aa28.91■■■□□ 2.22
TSR3-201ENST00000007390 CDK7P50613 346 aa28.91■■■□□ 2.22
TSR3-201ENST00000007390 NFXL1Q6ZNB6 911 aa28.91■■■□□ 2.22
TSR3-201ENST00000007390 RMDN3Q96TC7 470 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms