RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Spice1Q8C804 860 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Col23a1Q8K4G2 532 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Stap2Q8R0L1 411 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cul5Q9D5V5 780 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Gm5737A0A140LI11 423 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Rsrc2A2RTL5 376 aaKnown RBP11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Etnk2A7MCT6 385 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cacnb3P54285 484 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Chp1P61022 195 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Klrg2Q3UM83 387 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Slc10a5Q5PT54 434 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Akap4Q60662 849 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Stxbp3Q60770 592 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ddx31Q6NZQ2 687 aaKnown RBP11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Sdccag8Q80UF4 717 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Epn1Q80VP1 575 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Bbs9Q811G0 885 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cep95Q8BVV7 827 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Phldb2Q8K1N2 1249 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ccdc14Q8K2J4 934 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Krt79Q8VED5 531 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Uap1Q91YN5 522 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Kremen1Q99N43 473 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 CutaQ9CQ89 177 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 ArcQ9WV31 396 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Bcorl1A2AQH4 1781 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Gm10378F6XQQ1 160 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Man1a2P39098 641 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cdc25aP48964 514 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cyp2e1Q05421 493 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Fbln1Q08879 705 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Qrich1Q3UA37 777 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Trpc6Q61143 930 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Trim25Q61510 634 aaKnown RBP11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ptger2Q62053 362 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lrrn2Q6PHP6 730 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Spag5Q7TME2 1165 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Pknox2Q8BG99 474 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Arhgef6Q8K4I3 771 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Atxn7Q8R4I1 867 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tmem192Q9CXT7 266 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Serpinb12Q9D7P9 423 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Fam217aQ9D9W6 419 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 March8Q9DBD2 286 aa11.36□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Itgb4A2A863 1818 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lbhd1A0A087WPA0 259 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Scgb2b11A0A087WR49 112 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Gm45208A0A140LJ36 292 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Rexo5D3YW29 759 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Prl2c3P04768 224 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Csf1rP09581 977 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 EporP14753 507 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Mybl2P48972 704 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Npr3P70180 536 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Krt86P97861 486 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Spata18Q0P557 537 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Znf532Q6NXK2 1036 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Thap3Q8BJ25 218 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Drd5Q8BLD9 478 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Maats1Q8BRC6 783 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ttc26Q8BS45 554 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 MslnlQ8C160 685 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ppfibp1Q8C8U0 969 aaKnown RBP11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Riox2Q8CD15 465 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Spata4Q8K3V1 295 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Klhl10Q9D5V2 608 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cmtr1Q9DBC3 837 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tacc2Q9JJG0 1149 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ccnt1Q9QWV9 724 aaKnown RBP11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Vav3Q9R0C8 847 aa11.35□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 MtrA6H5Y3 1253 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 ByslO54825 436 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Copb2O55029 905 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Pip4k2aO70172 405 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Setd4P58467 439 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Pstpip1P97814 415 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tnfaip8l3Q3TBL6 204 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tigd5Q499M4 642 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 CbarpQ66L44 698 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Znf280dQ68FE8 974 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lrrcc1Q69ZB0 1026 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ercc6lQ8BHK9 1240 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Scfd1Q8BRF7 639 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Fam53cQ8BXQ8 393 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Slc9b1Q8C0X2 565 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 MtrrQ8C1A3 696 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Q8CEZ4 452 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lmbrd1Q8K0B2 537 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ccdc12Q8R344 166 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ifih1Q8R5F7 1025 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tmem39aQ9CYC3 486 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 4930548H24RikQ9D496 437 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 AdnpQ9Z103 1108 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Gm7168A0AUV4 508 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Gm4985A2ALC6 410 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Sept2P42208 361 aaKnown RBP11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Psmb7P70195 277 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ano9P86044 747 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Meis2P97367 477 aa11.34□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Jakmip3Q5DTN8 844 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms