RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Tbx18Q9EPZ6 613 aa13.43□□□□□ -0.26
Herc4-208ENSMUST00000219577 Tmem191cQ9JJB1 302 aa13.43□□□□□ -0.26
Herc4-208ENSMUST00000219577 Tex13cD3YU32 604 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Cct5P80316 541 aaKnown RBP13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Rexo1Q7TT28 1213 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Traf3ip3Q8C0G2 513 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Xrcc4Q924T3 326 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Glrx3Q9CQM9 337 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Haus2Q9CQS9 234 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Golph3Q9CRA5 298 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Prr29B1ARI9 187 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Art2aP17981 287 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Tnni3kQ5GIG6 834 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Pabpc4Q6PHQ9 660 aaKnown RBP13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ublcp1Q8BGR9 318 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 LRWD1Q8BUI3 648 aaKnown RBP13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Taok3Q8BYC6 898 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Lrp2bpQ9D4C6 346 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Mss51Q9D5Z5 446 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Gm38392E9Q2A2 434 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Men1O88559 611 aaKnown RBP13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Fam183bQ5NC57 135 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Hoxa13Q62424 386 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ppm1eQ80TL0 749 aa13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 AatfQ9JKX4 526 aaKnown RBP13.42□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ubxn1Q922Y1 297 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 1700020D05RikQ99PB1 294 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Slfn1Q9Z0I7 337 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 NesQ6P5H2 1864 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 CluhQ5SW19 1315 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 DohhA0A1Y7VJ29 135 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Bpifb4A2BGH0 617 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Dnajc21E9Q8D0 531 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ankrd35E9Q9D8 996 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Vmn2r68L7N2B3 851 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 LdhaP06151 332 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Lrrc4bP0C192 709 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Hmgb1P63158 215 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ezh2Q61188 746 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Cep70Q6IQY5 616 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Lrrc1Q80VQ1 524 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Iqcb1Q8BP00 598 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Klhl7Q8BUL5 586 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ddx19bQ8BZY3 494 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Eps8l2Q99K30 729 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Mmtag2Q99LX5 260 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Gtpbp4Q99ME9 634 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Rcan1Q9JHG6 198 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Jag1Q9QXX0 1218 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Rsbn1lD3Z0K6 821 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 HmmrQ00547 794 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Armcx3Q8BHS6 379 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Fam53cQ8BXQ8 393 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 SltmQ8CH25 1031 aaKnown RBP13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Emilin2Q8K482 1074 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Tsnaxip1Q99P25 704 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Trmt44Q9D2Q2 713 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Psmd10Q9Z2X2 231 aa13.41□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ulk4Q3V129 1303 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Mboat4P0C7A3 435 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Eef2P58252 858 aaKnown RBP13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Arglu1Q3UL36 271 aaKnown RBP13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Slc9a2Q3ZAS0 814 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Kiaa1211Q5PR69 1207 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Lrrcc1Q69ZB0 1026 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Naa35Q6PHQ8 725 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Haus1Q8BHX1 278 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Zdhhc14Q8BQQ1 489 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Efcab8Q8C9R9 203 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Kiaa0319lQ8K135 1048 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ndst4Q9EQW8 872 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 1700016G14RikA0A286YCZ6 238 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Pla2g4aP47713 748 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ncf1Q09014 390 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Rtkn2Q14B46 604 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Bbof1Q3V079 533 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Gngt1Q61012 74 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 PigsQ6PD26 555 aaKnown RBP13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Tlr11Q6R5P0 926 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Q8C6G1 249 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Fbxo18Q8K2I9 1042 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Mrvi1Q9WUX5 899 aaKnown RBP13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Etnk2A7MCT6 385 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Tdo2P48776 406 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Krt87Q6IMF0 495 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Olfr832Q7TRG9 312 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ildr1Q8CBR1 537 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Usp27Q8CEG8 438 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 AdarQ99MU3 1178 aaKnown RBP13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Nol7Q9D7Z3 254 aaKnown RBP13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Ccdc89Q9DA73 370 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 CoasyQ9DBL7 563 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Pex11aQ9Z211 246 aa13.4□□□□□ -0.26
Herc4-208ENSMUST00000219577 Tnks1bp1P58871 1720 aa13.4□□□□□ -0.27
Herc4-208ENSMUST00000219577 EregQ61521 162 aa13.39□□□□□ -0.27
Herc4-208ENSMUST00000219577 Onecut3Q8K557 490 aa13.39□□□□□ -0.27
Herc4-208ENSMUST00000219577 Card14Q99KF0 999 aa13.39□□□□□ -0.27
Herc4-208ENSMUST00000219577 Ess2O70279 479 aa13.39□□□□□ -0.27
Herc4-208ENSMUST00000219577 Cacna2d4Q5RJF7 1116 aa13.39□□□□□ -0.27
Herc4-208ENSMUST00000219577 Shc3Q61120 474 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms