RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 DeptorQ570Y9 409 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Vmn1r191Q8K4D0 298 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Ppp1r9aH3BJD6 1292 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Samhd1Q60710 627 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Slc7a6osQ7TPE5 306 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 GancQ8BVW0 898 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 CtsqQ91ZF4 343 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Efhd1Q9D4J1 240 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Ccdc83Q9D4V3 305 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Ccdc89Q9DA73 370 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 PycardQ9EPB4 193 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Sertad1Q9JL10 236 aa17.02■□□□□ 0.32
Upf1-202ENSMUST00000215817 Bpifb4A2BGH0 617 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Rrp1P56183 494 aaKnown RBP17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Pafah1b1P63005 410 aaKnown RBP17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Znf652Q5DU09 608 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Cypt2Q6P924 180 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Zbed4Q80WQ9 1168 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Adgra3Q7TT36 1310 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Pabpc1lA2A5N3 607 aaKnown RBP17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Klhl34A2AI76 644 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Krt78E9Q0F0 1068 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Krt15Q61414 452 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 LRWD1Q8BUI3 648 aaKnown RBP17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Bub1bQ9Z1S0 1052 aa17.02■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gm5934D3Z4U6 212 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Nim1kQ8BHI9 436 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Phldb2Q8K1N2 1249 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Slc5a5Q99PN0 618 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Wdr64Q9D565 1086 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Eif4enif1Q9EST3 983 aaKnown RBP17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gm45194A0A140LJG2 572 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Ildr2B5TVM2 661 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Krt18P05784 423 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Npr3P70180 536 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 E4f1Q8CCE9 783 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Krtap5-3Q9D226 196 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Pex11aQ9Z211 246 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Zfp804bA0A0G2JGH6 1343 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Krt14Q61781 484 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Zscan22Q8BGS5 496 aa17.01■□□□□ 0.31
Upf1-202ENSMUST00000215817 Cetn3O35648 167 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Nr3c2Q8VII8 978 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 MyocdQ8VIM5 935 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Txnrd3Q99MD6 652 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Rgs17Q9QZB0 210 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Znf394Q9Z1D9 521 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Siglec1Q62230 1695 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Trpm3Q5F4S9 1721 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gm43638A0A0J9YU36 694 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gm1993A6X8I0 212 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 SlxD3Z347 212 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Pak1O88643 545 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Ero1bQ8R2E9 467 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Pstpip2Q99M15 334 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Wnk3Q80XP9 1757 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Ddit3P35639 168 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Nbr1P97432 988 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gjb4Q02738 266 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Lca5Q80ST9 704 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Tspyl4Q8VD63 406 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 RubcnlQ3TD16 648 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Rapgef1Q3UHC1 1224 aa17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Trim25Q61510 634 aaKnown RBP17■□□□□ 0.31
Upf1-202ENSMUST00000215817 Pdrg1P59048 133 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Bco2Q99NF1 532 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Mcm6P97311 821 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Slc10a5Q5PT54 434 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 ZyxQ62523 564 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gtpbp4Q99ME9 634 aaKnown RBP16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Serpinb6bO08804 377 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Nr5a1P33242 462 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 PgfP49764 158 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Zfp90Q61967 636 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Lrrc41Q8K1C9 807 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Rsph3bQ9DA80 389 aa16.99■□□□□ 0.31
Upf1-202ENSMUST00000215817 Avpr1aQ62463 423 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Traf3ip3Q8C0G2 513 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Cyp2d34L7N463 504 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Kctd3Q8BFX3 815 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 NelfbQ8C4Y3 580 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Txnrd2Q9JLT4 524 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Akt3Q9WUA6 479 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Gm4841E9QAA8 417 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Cct6aP80317 531 aaKnown RBP16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Mpp4Q6P7F1 635 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Camkk2Q8C078 588 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Alg3Q8K2A8 438 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Inpp5bQ8K337 993 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Tmod3Q9JHJ0 352 aa16.98■□□□□ 0.31
Upf1-202ENSMUST00000215817 Cyp7b1Q60991 507 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Nrbp2Q91V36 499 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 AtrnQ9WU60 1428 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Slc2a13Q3UHK1 637 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Atp13a3Q5XF89 1219 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Caps2Q8BUG5 550 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Nkx1-1G3UXB3 402 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 SfnO70456 248 aaKnown RBP16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 Cbx2P30658 519 aa16.97■□□□□ 0.31
Upf1-202ENSMUST00000215817 StamP70297 548 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms