RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Ppil4Q9CXG3 492 aaKnown RBP10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Dnaaf5B9EJR8 853 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Camsap3Q80VC9 1252 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Mtrf1Q8K126 446 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ddx39aQ8VDW0 427 aaKnown RBP10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 LpxnQ99N69 386 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 A0A1W2P7S8 802 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Myo1eE9Q634 1107 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Cul4aQ3TCH7 759 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Mphosph8Q3TYA6 858 aaKnown RBP10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Nlrp4fQ66X05 959 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Cdc5lQ6A068 802 aaKnown RBP10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Adat2Q6P6J0 191 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Sfr1Q8BP27 319 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Wdr47Q8CGF6 920 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 RestQ8VIG1 1082 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Kdm8Q9CXT6 414 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Fam213aQ9CYH2 218 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Maged2Q9ER67 616 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Capn10Q9ESK3 666 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm11985A0A1B0GS61 206 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Serpina3iD3Z450 408 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Top3aO70157 1003 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Taf1bP97358 586 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Hddc2Q3SXD3 199 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pcdhb12Q91Y07 789 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Mphosph6Q9D1Q1 161 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Erap1Q9EQH2 930 aa10.1□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Krt1P04104 637 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pa2g4P50580 394 aaKnown RBP10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Acap2Q6ZQK5 770 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Cyp26b1Q811W2 512 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ppp2r2cQ8BG02 447 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Aldh8a1Q8BH00 487 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Zbtb18Q9WUK6 522 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 PogzQ8BZH4 1409 aaKnown RBP10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Ano3A2AHL1 981 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Serpinb3aG3X9V8 387 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Lmnb2P21619 596 aaKnown RBP10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pde6bP23440 856 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Alox15P39654 663 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 WhammQ571B6 793 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Pcdha7Q91Y13 937 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 EhhadhQ9DBM2 718 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm20911A0A087WSS0 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gbp11A9YVJ5 442 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 IdeQ9JHR7 1019 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Psmd10Q9Z2X2 231 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm29276A0A087WNW5 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm21117A0A087WPJ9 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm20820A0A087WPP3 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm20937A0A087WQA3 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm21258A0A087WQC7 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm28102A0A087WQL3 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm21095A0A087WR14 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm20792A0A087WRF5 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm21865A0A087WRL2 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm28576A0A087WRP6 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm28490A0A087WRT9 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm21294A0A087WS79 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm20824A0A087WS97 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm21996A0A087WSS9 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm28870A0A0A6YW38 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm29866A0A0A6YX04 222 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Znf711A2ANX9 761 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 TpbpaP13438 124 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Myo1fP70248 1099 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Q3TTJ4 293 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gas7Q60780 421 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rtl3Q6P1Y1 553 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gm21627Q810R0 219 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Rnf8Q8VC56 488 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Atg3Q9CPX6 314 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Eif4g1Q6NZJ6 1600 aaKnown RBP10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Trim15G3UY57 292 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Psma3O70435 255 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Sh3gl2Q62420 352 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Fermt3Q8K1B8 665 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Lzts2Q91YU6 671 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Tceal1Q921P9 165 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Krt36B1AQ75 473 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Cpb1B2RS76 415 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 CiitaP79621 1155 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Serpinb3dQ6UKZ0 387 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Gpcpd1Q8C0L9 675 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Prkag2Q91WG5 566 aa10.09□□□□□ -0.79
Col6a5-201ENSMUST00000165165 Urb2E9Q7L1 1524 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Setd1bQ8CFT2 1985 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Lsp1P19973 330 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Prim1P20664 417 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 LifrP42703 1092 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cab39Q06138 341 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zmym1Q3TJB1 983 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 HnrnprQ8VHM5 632 aaKnown RBP10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nrbp2Q91V36 499 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Med21Q9CQ39 144 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 CinpQ9D0V8 212 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zfyve19Q9DAZ9 389 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Angpt1O08538 498 aa10.08□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nxf2Q4ZGD8 691 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 105.1 ms