RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Gbp8Q2V6D6 525 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm5169Q5M8P2 212 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 CnstQ8CBC4 711 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tlcd1Q99JT6 247 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Zmynd10Q99ML0 440 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Syap1Q9D5V6 365 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Adamts12Q811B3 1600 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ube4aE9Q735 1028 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Kif5aP33175 1027 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Irak1Q62406 710 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ddx31Q6NZQ2 687 aaKnown RBP12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Apol7cQ8C6E1 369 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tnpo2Q99LG2 887 aaKnown RBP12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Psma8Q9CWH6 250 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ror2Q9Z138 944 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gfpt2Q9Z2Z9 682 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Npc1l1Q6T3U4 1333 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cyp2c23E9Q5K4 494 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Atp2a2O55143 1044 aaKnown RBP12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Krt13P08730 437 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pth1rP41593 591 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pcif1P59114 706 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 GabpaQ00422 454 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Q3TTJ4 293 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Usp50Q6P8X6 390 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Arhgap24Q8C4V1 747 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Zcchc8Q9CYA6 709 aaKnown RBP12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ccne2Q9Z238 404 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Usp54Q8BL06 1588 aaKnown RBP12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Depdc5P61460 1591 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Setbp1Q9Z180 1582 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Bfsp1A2AMT1 669 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nek1P51954 1203 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Zmym1Q3TJB1 983 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Mapk6Q61532 720 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Zbtb7bQ64321 544 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ppp2r5bQ6PD28 497 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 TwistnbQ78WZ7 330 aaKnown RBP12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ints4Q8CIM8 964 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Abhd8Q8R0P8 439 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Dynll2Q9D0M5 89 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ccdc182Q9D9C6 152 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Aldh18a1Q9Z110 795 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ugt1a8D3Z748 530 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ugt1a10E9PXN7 530 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm6583E9Q8Z1 469 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nmt2O70311 529 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 XlrP05531 208 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Krt86P97861 486 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pabpc4Q6PHQ9 660 aaKnown RBP12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cep85Q8BMK0 761 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 PaoxQ8C0L6 504 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ophn1Q99J31 802 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Sytl1Q99N80 567 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ndufb9Q9CQJ8 179 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tfap4Q9JIZ5 338 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ano3A2AHL1 981 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Sh2d4bA6X942 431 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Chil3O35744 398 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Senp1P59110 640 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nlrx1Q3TL44 975 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pim2Q62070 370 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ctnna3Q65CL1 895 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tlr11Q6R5P0 926 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 E330017A01RikQ8BU47 192 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Sept11Q8C1B7 431 aaKnown RBP12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Q8C6G1 249 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Riox2Q8CD15 465 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Lrrc14Q8VC16 493 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ces1dQ8VCT4 565 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Rrp1bQ91YK2 724 aaKnown RBP12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Msh6P54276 1358 aaKnown RBP12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 4932429P05RikA2ADI4 785 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Myo1eE9Q634 1107 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Myo1aO88329 1043 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Traf5P70191 558 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Myo1fP70248 1099 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cep57Q8CEE0 500 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Stoml1Q8CI66 399 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nup58Q8R332 587 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Snx24Q9CRB0 169 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cnpy3Q9DAU1 276 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Kdm6bQ5NCY0 1641 aa12.75□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Lonrf2B2RT44 518 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ccdc78D3Z5T1 437 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm28043E0CXC2 719 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Plekhg1F6S200 1446 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nr1i2O54915 431 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 P4hbP09103 509 aaKnown RBP12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Stat5bP42232 786 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tsr1Q5SWD9 803 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Srp68Q8BMA6 625 aaKnown RBP12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Acot11Q8VHQ9 594 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Atad3Q925I1 591 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gimd1E9PW74 217 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pdha1P35486 390 aaKnown RBP12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Fam178bQ24JP3 464 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm10488Q4KL05 212 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm14819Q62478 212 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 QarsQ8BML9 775 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms