RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Znf667Q2TL60 609 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Yipf3Q3UDR8 347 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pls1Q3V0K9 630 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tab3Q571K4 716 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tbc1d1Q60949 1255 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 PnocQ64387 187 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Stambpl1Q76N33 436 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tmem179Q8BHH9 233 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Trpa1Q8BLA8 1125 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Klhl7Q8BUL5 586 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Usp44Q8C2S0 711 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ccdc182Q9D9C6 152 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 GgcxQ9QYC7 757 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Entpd5Q9WUZ9 427 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Fbf1A2A870 1173 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Nfil3O08750 462 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Eef1dP57776 281 aaKnown RBP9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rnpc3Q3UZ01 514 aaKnown RBP9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 IcoslgQ9JHJ8 322 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 MefvQ9JJ26 767 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pus7B7ZNL8 666 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Slc7a1Q09143 622 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 ChukQ60680 745 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Atxn2lQ7TQH0 1049 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 KhnynQ80U38 671 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Slc39a11Q8BWY7 342 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 NelfbQ8C4Y3 580 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Sox30Q8CGW4 782 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kcnj14Q8JZN3 434 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Champ1Q8K327 802 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Slc35f6Q8VE96 372 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Spats2lQ91WJ7 558 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Prpf6Q91YR7 941 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Sf3b3Q921M3 1217 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Scrn1Q9CZC8 414 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ube3bQ9ES34 1070 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Vnn1Q9Z0K8 512 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Usp32F8VPZ3 1604 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Usp42B2RQC2 1324 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Casz1Q9CWL2 1761 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Taf4bG5E8Z2 855 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Exoc4O35382 975 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Folh1O35409 752 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Chp1P61022 195 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Fam178bQ24JP3 464 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 MycbpapQ5SUV2 932 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Glis3Q6XP49 780 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Haus7Q8BKT8 364 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Dtnbp1Q91WZ8 352 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Uap1Q91YN5 522 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 HibadhQ99L13 335 aaKnown RBP9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Psma8Q9CWH6 250 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Trp53inp1Q9QXE4 239 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kcnq2Q9Z351 759 aa9.71□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Map3k15A2AQW0 1331 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Chd4Q6PDQ2 1915 aaKnown RBP9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ift172Q6VH22 1749 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Il7P10168 154 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Zfy1P10925 782 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Pola2P33611 600 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Slc10a4Q3UEZ8 437 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Luc7l3Q5SUF2 432 aaKnown RBP9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Exoc1Q8R3S6 894 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tube1Q9D6T1 475 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tnrc6bQ8BKI2 1810 aaKnown RBP9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cdc27A2A6Q5 825 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tbc1d8bA3KGB4 1114 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Npy5rO70342 466 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tgfb2P27090 414 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Nkx2-5P42582 318 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ppp1r12cQ3UMT1 782 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ddx3yQ62095 658 aaKnown RBP9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 4921504E06RikQ8CET2 560 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ero1aQ8R180 464 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ctage5Q8R311 779 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Dnajc17Q91WT4 303 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 EpgnQ924X1 152 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tex19.1Q99MV2 351 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Stx17Q9D0I4 301 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 PrphP15331 475 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Nedd4P46935 887 aaKnown RBP9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccdc138Q0VF22 680 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ankrd13cQ3UX43 541 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Lrrc42Q8R2U7 421 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Thap2Q9D305 217 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Uts2Q9QZQ3 123 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Sorbs3Q9R1Z8 733 aa9.7□□□□□ -0.86
Col28a1-201ENSMUST00000115537 DgkiD3YWQ0 1071 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm5934D3Z4U6 212 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Fkbp1aP26883 108 aaKnown RBP9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 NpeppsQ11011 920 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Swap70Q6A028 585 aaKnown RBP9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Trim56Q80VI1 734 aaKnown RBP9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ascc1Q9D8Z1 356 aaKnown RBP9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Znf704Q9ERQ3 566 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Scnn1bQ9WU38 638 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kif20bQ80WE4 1774 aaKnown RBP9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Nfat5Q9WV30 1534 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm382B1AXN3 1250 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 D830030K20RikE9PYQ5 218 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms