RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Igdcc3Q8BQC3 813 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Eif4a3Q91VC3 411 aaKnown RBP12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Hps4Q99KG7 671 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Galntl5Q9D4M9 431 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Apol6B7ZC55 329 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ano9P86044 747 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Acot10Q32MW3 439 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Spg7Q3ULF4 781 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 EregQ61521 162 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Zbtb39Q6PDK0 712 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tbc1d23Q8K0F1 684 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Rps6ka4Q9Z2B9 773 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Bpifb4A2BGH0 617 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tubb4bP68372 445 aaKnown RBP12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Lilrb3P97484 841 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Cep70Q6IQY5 616 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Kremen1Q99N43 473 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ndst4Q9EQW8 872 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Myo1cQ9WTI7 1063 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Cct5P80316 541 aaKnown RBP12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Oxr1Q4KMM3 866 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ggt6Q6PDE7 497 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Mettl5Q8K1A0 209 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Glrx3Q9CQM9 337 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Efhd1Q9D4J1 240 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Trmt112Q9DCG9 125 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Sertad1Q9JL10 236 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Gm7168A0AUV4 508 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Duox1A2AQ92 1551 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 DnttP09838 530 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Actn4P57780 912 aaKnown RBP12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Rbbp6P97868 1790 aaKnown RBP12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Znf827Q505G8 1078 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Rhobtb3Q9CTN4 611 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tmem192Q9CXT7 266 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Syce1Q9D495 329 aa12.78□□□□□ -0.36
Vps54-202ENSMUST00000109578 Lrrc32G3XA59 663 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Men1O88559 611 aaKnown RBP12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Kifap3P70188 793 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Kcnj11Q61743 390 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Spag7Q7TNE3 227 aaKnown RBP12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ankrd13aQ80UP5 588 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 D130040H23RikQ8BII3 405 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Lmbrd1Q8K0B2 537 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 HyiQ8R1F5 277 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Adcy3Q8VHH7 1145 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 2310002L09RikQ9D7L5 217 aa12.77□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tcp10bE9PYJ0 438 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Pdrg1P59048 133 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Fam193aQ8CGI1 1231 aaKnown RBP12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccdc105Q9D4K7 499 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sec14l1A8Y5H7 715 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Mx1P09922 631 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gas1Q01721 343 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Rhpn1Q61085 643 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Mettl25Q6NXH8 597 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Tldc1Q8K0P3 455 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Plagl2Q925T4 496 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 GakQ99KY4 1305 aa12.77□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gm42641I6L9G2 585 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Pip4k2aO70172 405 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gna11P21278 359 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Abcb4P21440 1276 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 AtripQ8BMG1 785 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Dclk3Q8BWQ5 790 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 NkrfQ8BY02 690 aaKnown RBP12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cacnb1Q8R3Z5 597 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ppp1r3gQ9CW07 347 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Saal1Q9D2C2 474 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Trim30cD3YVI9 513 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Grm4Q68EF4 912 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 VillQ91YD6 859 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Prpf6Q91YR7 941 aaKnown RBP12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 AacsQ9D2R0 672 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Rpf2Q9JJ80 306 aaKnown RBP12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Kank3Q9Z1P7 791 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Kifc2O08672 792 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Zfpm1O35615 995 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Slc12a2P55012 1205 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ica1lQ3TY65 431 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 WhrnQ80VW5 918 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cc2d1bQ8BRN9 848 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Usp15Q8R5H1 981 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cwc15Q9JHS9 229 aaKnown RBP12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Tacc2Q9JJG0 1149 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Peg12Q9WVA7 283 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 GsdmeQ9Z2D3 512 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Psma7Q9Z2U0 248 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Nlrx1Q3TL44 975 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ankrd24Q80VM7 985 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Lrsam1Q80ZI6 727 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Rcor2Q8C796 523 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Olfr805Q8VFI4 319 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Serpinb12Q9D7P9 423 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 CenphQ9QYM8 241 aa12.76□□□□□ -0.37
Vps54-202ENSMUST00000109578 Zscan18E9PUD6 809 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Hmgb1P63158 215 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Stim2P83093 746 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Psg29Q3URN6 468 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccdc114Q3UX62 658 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms