RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Atoh1P48985 351 aa23.95■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Stxbp5lQ5DQR4 1185 aa23.95■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Dcaf15Q6PFH3 600 aa23.95■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 E4f1Q8CCE9 783 aa23.95■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 PdhbQ9D051 359 aa23.95■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Cmtm5Q9D6G9 156 aa23.95■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Large1Q9Z1M7 756 aa23.95■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Ppp1r9aH3BJD6 1292 aa23.94■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 VegfbP49766 207 aa23.94■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Tfcp2l1Q3UNW5 479 aa23.94■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Dcaf8Q8N7N5 591 aa23.94■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Atp2b1G5E829 1220 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Cdc25aP48964 514 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Igf2bp2Q5SF07 592 aaKnown RBP23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Dnajc19Q9CQV7 116 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Snrnp35Q9D384 244 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Sapcd2Q9D818 391 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Ccdc173A0JLY1 547 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Ripor3A1L3T7 938 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Nr1i2O54915 431 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Hoxa11P31311 313 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Xxylt1Q3U4G3 392 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Hoxa13Q62424 386 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Gpbp1Q6NXH3 473 aaKnown RBP23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Olfml1Q8BSH2 233 aa23.93■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Rexo5D3YW29 759 aa23.92■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Nt5c2Q3V1L4 560 aa23.92■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Ehd2Q8BH64 543 aa23.92■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Lrrc24Q8BHA1 521 aa23.92■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Kbtbd4Q8R179 534 aa23.92■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Vta1Q9CR26 309 aa23.92■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Sgpp1Q9JI99 430 aa23.92■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Sbf2E9PXF8 1872 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Serpina16D3Z660 418 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 AoahO35298 574 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Dnajb6O54946 365 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Traf5P70191 558 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Spryd7Q3TFQ1 196 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Mtss1lQ6P9S0 715 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Fbxo10Q7TQF2 950 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Fbxo18Q8K2I9 1042 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Q9DAQ4 598 aa23.91■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Usp34Q6ZQ93 3582 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Zkscan7E9PVW1 718 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Bin1O08539 588 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 FlgP11088 336 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Clic6Q8BHB9 596 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 E2f4Q8R0K9 410 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Dnttip2Q8R2M2 758 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Luzp1Q8R4U7 1068 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Sertad1Q9JL10 236 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Vnn1Q9Z0K8 512 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Btbd19S4R1I0 287 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Pus7B7ZNL8 666 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Pou3f3P31361 497 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Slc7a1Q09143 622 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Rgl1Q60695 768 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Rgl2Q61193 778 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Ccna1Q61456 421 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Eif3j2Q66JS6 263 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Rrp12Q6P5B0 1295 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Pde5aQ8CG03 865 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Syne4Q8CII8 388 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Mettl5Q8K1A0 209 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Golph3lQ8R088 285 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 NkapQ9D0F4 415 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 SerhlQ9EPB5 311 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Rcan3Q9JKK0 239 aa23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Fxr2Q9WVR4 673 aaKnown RBP23.9■■□□□ 1.42
Ccdc88a-202ENSMUST00000109477 Zmynd8A2A484 1235 aaKnown RBP23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Krt78E9Q0F0 1068 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Luc7l2Q7TNC4 392 aaKnown RBP23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Cep128Q8BI22 1102 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 DaglbQ91WC9 669 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Trub2Q91WG3 331 aaKnown RBP23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 F11Q91Y47 624 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 MbipQ99LQ1 341 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Brms1Q99N20 246 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Serpinb3bQ9D1Q5 387 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Pex3Q9QXY9 372 aa23.89■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Gm5737A0A140LI11 423 aa23.88■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 A0A1L1SQF0 893 aa23.88■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Zc3h7bF8VPP8 982 aaKnown RBP23.88■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Map4k1P70218 827 aa23.88■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Bach1P97302 739 aa23.88■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 GypcQ78HU7 95 aa23.88■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Usp33Q8R5K2 909 aa23.88■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Hmx1O70218 332 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Ccdc84Q4VA36 332 aaKnown RBP23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Bbs9Q811G0 885 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Cabp7Q91ZM8 215 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Krt82Q99M74 516 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Pcdha4O88689 947 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Mpp3O88910 568 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Fam83hQ148V8 1209 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Nlrx1Q3TL44 975 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Sun3Q5SS91 320 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 RragbQ6NTA4 374 aa23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 Dync1li2Q6PDL0 492 aaKnown RBP23.87■■□□□ 1.41
Ccdc88a-202ENSMUST00000109477 DnerQ8JZM4 737 aa23.87■■□□□ 1.41
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms