RNA–Protein interactions for RNA: ENSMUST00000087316.5

Capn6-201, Transcript of Calpain-6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Capn6, Length 3,561 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6-201ENSMUST00000087316 Brd3Q8K2F0 726 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Rab3il1Q8VDV3 383 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Hps3Q91VB4 1002 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Pcdhb22Q91XZ8 794 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Atp12aQ9Z1W8 1035 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Sbf2E9PXF8 1872 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Irgm2A0A140LIF8 407 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Serpinb2P12388 415 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 PtpraP18052 829 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 CtshP49935 333 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tubb5P99024 444 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Glra4Q61603 456 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Rbm12b2Q66JV4 834 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Ncoa7Q6DFV7 943 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 TxlnaQ6PAM1 554 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Dync1li2Q6PDL0 492 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Zfp341Q6PGC9 846 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tekt3Q6X6Z7 490 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Lrrc15Q80X72 579 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Spata21Q8BHW6 681 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tpcn2Q8BWC0 731 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Epha10Q8BYG9 1007 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Zmynd15Q8C0R7 736 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 ItpkaQ8R071 459 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Vmn1r199Q8R280 367 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Usp33Q8R5K2 909 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Golga5Q9QYE6 729 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Suclg2Q9Z2I8 433 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tanc1Q0VGY8 1856 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Gm1758F6VZZ1 202 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 LtkP08923 888 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 CatspereP0DP43 985 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Pou3f3P31361 497 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Traf1P39428 409 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Irx2P81066 474 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Flt3Q00342 1000 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Rtel1Q0VGM9 1203 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tmtc1Q3UV71 942 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Olfr121Q5CZY0 321 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Scnn1aQ61180 699 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Ireb2Q811J3 963 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 QarsQ8BML9 775 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 9230110C19RikQ8CC70 267 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Terf2ipQ91VL8 393 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Rrp1bQ91YK2 724 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Brms1Q99N20 246 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tomm22Q9CPQ3 142 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Akap8Q9DBR0 687 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Pes1Q9EQ61 584 aaKnown RBP5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Clip2Q9Z0H8 1047 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Syngap1F6SEU4 1340 aa5.68□□□□□ -1.5
Capn6-201ENSMUST00000087316 Lcmt1A0A0U1RNF2 332 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tbc1d8bA3KGB4 1114 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Pla2g4bP0C871 782 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 RargP18911 458 aaKnown RBP5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Pde6aP27664 859 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Sparcl1P70663 650 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Kiaa1468Q148V7 1216 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Taf3Q5HZG4 932 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Nab2Q61127 525 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 D130040H23RikQ8BII3 405 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Pwp2Q8BU03 919 aaKnown RBP5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Terb1Q8C0V1 768 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Pus7lQ8CE46 702 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Rbm19Q8R3C6 952 aaKnown RBP5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Mtmr4Q91XS1 1190 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Zbtb12Q9Z150 459 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Scgb2b18A0A087WPA9 112 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Tpd52l1O54818 204 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 GmnnO88513 206 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Stx8O88983 236 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Atoh1P48985 351 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Samsn1P57725 372 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Snap25P60879 206 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 LyarQ08288 388 aaKnown RBP5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Spryd7Q3TFQ1 196 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Ccdc102aQ3TMW1 549 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 PRAG1Q571I4 1179 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Cct6bQ61390 531 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Sp4Q62445 782 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Npdc1Q64322 332 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 PodnQ7TQ62 611 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Ythdf3Q8BYK6 585 aaKnown RBP5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Rbm28Q8CGC6 750 aaKnown RBP5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Ppp1r3gQ9CW07 347 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Rnf181Q9CY62 165 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Sapcd2Q9D818 391 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Eid1Q9DCR4 169 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 NbnQ9R207 751 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Zfp853A0A1D5RM95 733 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Prr16A3KMN5 304 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Skint7A7XV04 395 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Mms22lB1AUR6 1238 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Zbtb21E9Q444 1094 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Chrna9G3X8Z7 479 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 PrphP15331 475 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Sash1P59808 1230 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Ano9P86044 747 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Nbr1P97432 988 aa5.67□□□□□ -1.5
Capn6-201ENSMUST00000087316 Foxn1Q61575 648 aa5.67□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms