RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Itgb7P26011 806 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Fbln1Q08879 705 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Srek1Q8BZX4 494 aaKnown RBP7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Nr2e3Q9QXZ7 395 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Ggps1Q9WTN0 300 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Greb1lB9EJV3 1913 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Pabpc1lA2A5N3 607 aaKnown RBP7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Arhgef10lA2AWP8 1280 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lrrc32G3XA59 663 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Art2aP17981 287 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 NfiaQ02780 532 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Pdlim7Q3TJD7 457 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Hsdl1Q8BTX9 330 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 MafaQ8CF90 359 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Alg3Q8K2A8 438 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Itm2cQ91VK4 269 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Stx6Q9JKK1 255 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Cabp5Q9JLK3 173 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Cd2apQ9JLQ0 637 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Ripk3Q9QZL0 486 aa7.77□□□□□ -1.17
Bdnf-201ENSMUST00000053317 TdgP56581 421 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Foxp1P58462 705 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 ErmnQ5EBJ4 281 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Rec8Q8C5S7 591 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Bag4Q8CI61 457 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gprc5cQ8K3J9 440 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 RnpepQ8VCT3 650 aaKnown RBP7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gmcl1Q920G9 524 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gm11985A0A1B0GS61 206 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Syce3B5KM66 88 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Trim30cD3YVI9 513 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Cavin1O54724 392 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Mt-CybP00158 381 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Syt2P46097 422 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lilrb3P97484 841 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gdf10P97737 476 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lrrfip1Q3UZ39 729 aaKnown RBP7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Rusc1Q8BG26 893 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Tmco3Q8BH01 678 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Taco1Q8K0Z7 294 aaKnown RBP7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Kctd10Q922M3 315 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Q9DAQ4 598 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Limd1Q9QXD8 668 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 AdnpQ9Z103 1108 aaKnown RBP7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Ms4a4aA0A087WRT7 236 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gm42641I6L9G2 585 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Pik3r1P26450 724 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 StamP70297 548 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gas1Q01721 343 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 C87499Q3UX49 493 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Cwf19l2Q8BG79 887 aaKnown RBP7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Tdp1Q8BJ37 609 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 AtripQ8BMG1 785 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Defb19Q8K3I8 83 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Coa7Q921H9 231 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Znf687Q9D2D7 1237 aa7.76□□□□□ -1.17
Bdnf-201ENSMUST00000053317 1700018F24RikB2RW27 314 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Palb2Q3U0P1 1104 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Tmed8Q3UHI4 326 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lrrc14bQ3UJB3 510 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Ubash3aQ3V3E1 624 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Trappc3lQ4KL14 181 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gas7Q60780 421 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Avpr1aQ62463 423 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Cyfip1Q7TMB8 1253 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Pramel7Q810Y8 479 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Zkscan1Q8BGS3 561 aaKnown RBP7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Depdc1aQ8CIG0 804 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Ctu1Q99J10 420 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Znf704Q9ERQ3 566 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Wfdc16A2A5H4 111 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gucy1a2F8VQK3 730 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gjb4Q02738 266 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Mphosph8Q3TYA6 858 aaKnown RBP7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Mrpl11Q9CQF0 192 aaKnown RBP7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Etnk1Q9D4V0 363 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 SisF8VQM5 1818 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Pitpnm2Q6ZPQ6 1335 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gm15448F6PZL4 682 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Cops5O35864 334 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Mboat4P0C7A3 435 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 RarbP22605 482 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gabpb2P81069 414 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Cnga2Q62398 664 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lca5Q80ST9 704 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Onecut3Q8K557 490 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 TbcbQ9D1E6 244 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Hmgn5Q9JL35 406 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Spocd1B1ASB6 936 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Tshz1Q5DTH5 1084 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Nacc1Q7TSZ8 514 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Rufy1Q8BIJ7 712 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Armc6Q8BNU0 468 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Lmbrd1Q8K0B2 537 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Gpr108Q91WD0 569 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Serpinb3bQ9D1Q5 387 aa7.75□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Catsper2A2ARP9 588 aa7.74□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Hoxa11P31311 313 aa7.74□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Tshz2Q68FE9 1030 aa7.74□□□□□ -1.17
Bdnf-201ENSMUST00000053317 Ift122Q6NWV3 1182 aa7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms