RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Nab2Q61127 525 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ctdspl2Q8BG15 465 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tmem87aQ8BXN9 555 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Stoml1Q8CI66 399 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rbm41Q8JZV4 413 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 MefvQ9JJ26 767 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 EcsitQ9QZH6 435 aa10.89□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Znf496Q5SXI5 585 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ppp1r13bQ62415 1087 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 CtifQ6PEE2 600 aaKnown RBP10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sept9Q80UG5 583 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Snx14Q8BHY8 964 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Zcchc8Q9CYA6 709 aaKnown RBP10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Mfap3lQ9D3X9 409 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ptpn23Q6PB44 1692 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 4930523C07RikE9Q2T4 99 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rad51bO35719 350 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Camk4P08414 469 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 LdhbP16125 334 aaKnown RBP10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Apba2P98084 750 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 C130026I21RikQ8C898 291 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Cep83Q9D5R3 692 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tpcn1Q9EQJ0 817 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Nlrp5Q9R1M5 1163 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccdc13D3YV10 709 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Krt13P08730 437 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sema3eP70275 775 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 EgfrQ01279 1210 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ric8aQ3TIR3 530 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rab34Q64008 259 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Q6PD19 689 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gbp9Q8BTS3 619 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rcor2Q8C796 523 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Trmt112Q9DCG9 125 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Nfat5Q9WV30 1534 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sh2d4bA6X942 431 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Prkg1P0C605 671 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sorbs1Q62417 1290 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ubxn10Q8BG34 277 aa10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Acsl3Q9CZW4 720 aaKnown RBP10.88□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Sem1P60897 70 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 SpertQ32MG2 446 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Nr1d1Q3UV55 615 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 LrmpQ60664 539 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Prm3Q62100 101 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Fam204aQ8C6C7 236 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Mettl5Q8K1A0 209 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Slc26a7Q8R2Z3 656 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Usp33Q8R5K2 909 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gdap1l1Q8VE33 370 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Eaf2Q91ZD6 262 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 1700109H08RikQ9D9C0 210 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Stk39Q9Z1W9 556 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm5580A0A0N4SVP8 411 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Esr2O08537 530 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 XlrP05531 208 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pald1P70261 859 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccdc110Q3V125 848 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Oxr1Q4KMM3 866 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 TfrcQ62351 763 aaKnown RBP10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pabpc4Q6PHQ9 660 aaKnown RBP10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Hps6Q8BLY7 805 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Iws1Q8C1D8 766 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Plcg2Q8CIH5 1265 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Cd2bp2Q9CWK3 342 aaKnown RBP10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Styxl1Q9DAR2 321 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pnpla7A2AJ88 1352 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Prdm2A2A7B5 1709 aaKnown RBP10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Camta1A2A891 1682 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Tdo2P48776 406 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Hdac4Q6NZM9 1076 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Cep104Q80V31 926 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rint1Q8BZ36 792 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Usp44Q8C2S0 711 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ttll1Q91V51 423 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Msantd4Q91YU3 345 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 GsdmeQ9Z2D3 512 aa10.87□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Proca1B0QZF7 307 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Mroh9G5E8L9 891 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Nlrx1Q3TL44 975 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Krt14Q61781 484 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 E330017A01RikQ8BU47 192 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Myef2Q8C854 591 aaKnown RBP10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Vmn1r199Q8R280 367 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Stat2Q9WVL2 923 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Lnx1O70263 728 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Slc4a1P04919 929 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 AdkP55264 361 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Gm10488Q4KL05 212 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Pla2g4eQ50L42 875 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccdc92bQ5SUE3 299 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Clec16aQ80U30 1036 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Snip1Q8BIZ6 383 aaKnown RBP10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Fam102bQ8BQS4 339 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Caps2Q8BUG5 550 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Ccdc15Q8C9M2 810 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Rilpl1Q9JJC6 406 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 RpgrQ9R0X5 1001 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 C5P06684 1680 aa10.86□□□□□ -0.67
Ldlr-201ENSMUST00000034713 Mon2Q80TL7 1715 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms