RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Fyb2A2A995 729 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Gm10093D3YYI8 482 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Hdac1O09106 482 aaKnown RBP13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Parp1P11103 1013 aaKnown RBP13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Sept4P28661 478 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 CebpaP53566 359 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Kcna4Q61423 654 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cyp2c29Q64458 490 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 NfrkbQ6PIJ4 1296 aaKnown RBP13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Moxd2Q7TT41 619 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Spata7Q80VP2 582 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cracr2bQ80ZJ8 394 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Gtf3c5Q8R2T8 520 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ankrd54Q91WK7 299 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Msgn1Q9JK54 188 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cdc45Q9Z1X9 566 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 HttP42859 3119 aa13.11□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Nme9A0A1L1SUL6 329 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Btnl4A2CG29 586 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 MycP01108 439 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Aco1P28271 889 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Stat1P42225 749 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Casc1Q6TDU8 730 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Rusc1Q8BG26 893 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Dnaaf2Q8BPI1 814 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Tsr2Q8C8T8 191 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cdan1Q8CC12 1239 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Nup88Q8CEC0 753 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 AnlnQ8K298 1121 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Tesk2Q8VCT9 570 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Smc1bQ920F6 1248 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Gpr37l1Q99JG2 481 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ndufb9Q9CQJ8 179 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Dis3Q9CSH3 958 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 TbcbQ9D1E6 244 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 DcpsQ9DAR7 338 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Maged1Q9QYH6 775 aaKnown RBP13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Nlrp5Q9R1M5 1163 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Wdr19Q3UGF1 1341 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Sall1Q9ER74 1322 aa13.1□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 AW822073A0A0N4SUK1 652 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Zc3h7bF8VPP8 982 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Vwa3bJ9JI28 736 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Nr5a1P33242 462 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 SqleP52019 572 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Lrrc14bQ3UJB3 510 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Fam189a2Q4FZH1 290 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 A1cfQ5YD48 595 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Grik5Q61626 979 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Zfp943Q6NZP4 507 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Atg4cQ811C2 458 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Dlg1Q811D0 905 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Fam126bQ8C729 530 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Phtf2Q8CB19 747 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Plcd1Q8R3B1 756 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Rufy2Q8R4C2 606 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cyp27a1Q9DBG1 533 aa13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Map3k20Q9ESL4 802 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Tmem132bF7BAB2 1078 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Rgs9O54828 675 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Syt1P46096 421 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Kcna2P63141 499 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Gcnt1Q09324 428 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Col19a1Q0VF58 1136 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Limch1Q3UH68 1057 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Mybpc2Q5XKE0 1136 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Zcchc18Q8VD24 393 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 GldcQ91W43 1025 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Anapc4Q91W96 807 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 GneQ91WG8 722 aaKnown RBP13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 F11Q91Y47 624 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Npm3Q9CPP0 175 aaKnown RBP13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Snx29Q9D3S3 818 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Etnk1Q9D4V0 363 aa13.08□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Pgap3A2A559 320 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cops5O35864 334 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Itgb5O70309 798 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Syt2P46097 422 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Rbp3P49194 1234 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Lpar1P61793 364 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Taf1bP97358 586 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 KhsrpQ3U0V1 748 aaKnown RBP13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cep63Q3UPP8 700 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Liat1Q810M6 228 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Zbtb9Q8CDC7 459 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Btbd7Q8CFE5 1130 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cchcr1Q8K2I2 770 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Ero1aQ8R180 464 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Ggps1Q9WTN0 300 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Sel1lQ9Z2G6 790 aa13.07□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Zfp853A0A1D5RM95 733 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Zscan20B2KFW1 1030 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Elmsan1E9Q2I4 1089 aaKnown RBP13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Phka1P18826 1241 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Pik3r1P26450 724 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 HmgcrQ01237 887 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Nlrx1Q3TL44 975 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Etaa1Q5SVT3 877 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Smarcc2Q6PDG5 1213 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 C2cd5Q7TPS5 1016 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms