RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Calm2P0DP27 149 aaKnown RBP19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Calm3P0DP28 149 aaKnown RBP19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Foxn3Q499D0 457 aa19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Mars2Q499X9 586 aaKnown RBP19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 RragaQ80X95 313 aa19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Ddx42Q810A7 929 aaKnown RBP19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Bap1Q99PU7 728 aa19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Eef1gQ9D8N0 437 aaKnown RBP19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 MefvQ9JJ26 767 aa19.62■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Gm4340L7N2C4 268 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Tmem60Q8K174 133 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Stn1Q8K2X3 378 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Cmtr1Q9DBC3 837 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 XlrP05531 208 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Serpina1bP22599 413 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Pde4dQ01063 747 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Gpbp1Q6NXH3 473 aaKnown RBP19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Olfr118Q7TRJ6 321 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Pcdha5Q91Y15 934 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Prl2c5Q9JLV9 222 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Nfs1Q9Z1J3 459 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 GakQ99KY4 1305 aa19.61■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 ChkbO55229 394 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Tnnc1P19123 161 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Hspa9P38647 679 aaKnown RBP19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Hmgb1P63158 215 aaKnown RBP19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Lrrc55Q3UY51 311 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 LnpkQ7TQ95 425 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Cep104Q80V31 926 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Arap2Q8BZ05 1703 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Trappc3O55013 180 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Scp2P32020 547 aaKnown RBP19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Tmod1P49813 359 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Slc8a1P70414 970 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Ssrp1Q08943 708 aaKnown RBP19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Traf3ip1Q149C2 625 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Psmd1Q3TXS7 953 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Kctd16Q5DTY9 427 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Mapk6Q61532 720 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Cep131Q62036 1060 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Sh3gl3Q62421 347 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Nlrp4fQ66X05 959 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 RgmbQ7TQ33 436 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Slc12a6Q924N4 1150 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 3830403N18RikQ9D6C3 208 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Pex3Q9QXY9 372 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Myh15E9Q264 1925 aa19.6■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Gm15262A0A140LIQ5 728 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Myo1fP70248 1099 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Spata5Q3UMC0 893 aaKnown RBP19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Ttf2Q5NC05 1138 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Arhgef2Q60875 985 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Xlr3bQ6P205 226 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Mmtag2Q99LX5 260 aaKnown RBP19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Lrrc57Q9D1G5 239 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Clstn1Q9EPL2 979 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Ndst4Q9EQW8 872 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Plcb1Q9Z1B3 1216 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Speer4dL7N216 212 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Eftud2O08810 971 aaKnown RBP19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Sox13Q04891 613 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Ublcp1Q8BGR9 318 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Snip1Q8BIZ6 383 aaKnown RBP19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Psma8Q9CWH6 250 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 1700109H08RikQ9D9C0 210 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Git2Q9JLQ2 708 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Tnrc6cQ3UHC0 1690 aaKnown RBP19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Myh4Q5SX39 1939 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Tcp10bE9PYJ0 438 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Myl3P09542 204 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 RcvrnP34057 202 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Rasa2P58069 847 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Mcm7Q61881 719 aaKnown RBP19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Znf280dQ68FE8 974 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Usp20Q8C6M1 916 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Lsm14bQ8CGC4 385 aaKnown RBP19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 PccaQ91ZA3 724 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 SncbQ91ZZ3 133 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Net1Q9Z206 595 aa19.59■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Pfkfb3A7UAK5 555 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 RelaQ04207 549 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 1700013D24RikQ0P521 120 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Gspt2Q149F3 632 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Shc3Q61120 474 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Cnnm4Q69ZF7 771 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 HelbQ6NVF4 1074 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Krt82Q99M74 516 aa19.58■□□□□ 0.73
Sqstm1-201ENSMUST00000015981 Pcdh10E9PXQ7 1057 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Nr1i2O54915 431 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 VimP20152 466 aaKnown RBP19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 GnpatP98192 678 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Slc38a10Q5I012 1090 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Slc9a1Q61165 820 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Fkbp3Q62446 224 aaKnown RBP19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cyp24a1Q64441 514 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Asic1Q6NXK8 526 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Rassf6Q80UQ2 353 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 OplahQ8K010 1288 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tor1aip1Q921T2 595 aaKnown RBP19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Alpk1Q9CXB8 1231 aa19.58■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms