RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	HOS4	P40480	1083 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	IMA5	P40884	581 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	RGD2	P43556	714 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	VPS68	Q12016	184 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	LDB17	Q12342	491 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	PEP12	P32854	288 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	TPO5	P36029	618 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	TOK1	P40310	691 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	CIN1	P40987	1014 aa		3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	ALO1	P54783	526 aa	Known RBP	3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	RHO3	Q00245	231 aa	Known RBP	3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	RSA3	Q05942	220 aa	Known RBP	3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	DBP10	Q12389	995 aa	Known RBP	3.41	□□□□□ -1.86
YPR158C-D	YPR158C-D	ATP2	P00830	511 aa	Known RBP	3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	SPS4	P09937	338 aa		3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	MGR1	P25573	417 aa		3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	POL4	P25615	582 aa		3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	RAD23	P32628	398 aa	Known RBP	3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	CDC13	P32797	924 aa	Known RBP	3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	MET18	P40469	1032 aa		3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	GLG2	P47011	380 aa		3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	ECM22	Q05958	814 aa	Predicted RBP	3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	YOR012W	Q12351	137 aa		3.4	□□□□□ -1.86
YPR158C-D	YPR158C-D	CDC37	P06101	506 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	DUN1	P39009	513 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	SEC9	P40357	651 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	LAS21	P40367	830 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	SAM37	P50110	327 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	ASI1	P54074	624 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	EFR3	Q03653	782 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	DON1	Q05610	365 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	ATG29	Q12092	213 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	MDM32	Q12171	622 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	AMD1	P15274	810 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	YMR124W	P39523	943 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	PIC2	P40035	300 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	NPY1	P53164	384 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	BTN2	P53286	410 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	MIX14	Q04341	121 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	GMC1	Q04399	608 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	MRPL25	P23369	157 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	HYM1	P32464	399 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	COX13	P32799	129 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	DBP7	P36120	742 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	ASC1	P38011	319 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	CIC1	P38779	376 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	AIR1	P40507	360 aa	Known RBP	3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	DAS1	P47005	663 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	OSH6	Q02201	448 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	TEN1	Q07921	160 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	YPL191C	Q08930	360 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	YOR214C	Q12282	236 aa		3.4	□□□□□ -1.87
YPR158C-D	YPR158C-D	ERG9	P29704	444 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	NFU1	P32860	256 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	LRG1	P35688	1017 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	HXT7	P39004	570 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	STB4	P50104	949 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	SLG1	P54867	378 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	MYO5	Q04439	1219 aa	Known RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	VPS36	Q06696	566 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	NOP6	Q07623	225 aa	Known RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	GLK1	P17709	500 aa	Known RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	HEM3	P28789	327 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	DAL3	P32459	195 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	SEC61	P32915	480 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	YKL107W	P34251	309 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	SPT8	P38915	602 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	ARF3	P40994	183 aa	RIP-Chip data	3.39	□□□□□ -1.87	not detected
YPR158C-D	YPR158C-D	MRPS35	P53292	345 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	TEP1	P53916	434 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	ADE13	Q05911	482 aa	Known RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	MHR1	Q06630	226 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	SAM3	Q08986	587 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	Q0182	Q9ZZW1	134 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	YIL177C	P40434	1758 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	YJL225C	P40889	1758 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	RBK1	P25332	333 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	DYS1	P38791	387 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
YPR158C-D	YPR158C-D	GPD2	P41911	440 aa	Known RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	ARG5,6	Q01217	863 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	GMC2	Q06201	188 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	RPL11A	P0C0W9	174 aa	Known RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
YPR158C-D	YPR158C-D	PFS1	P38872	237 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	RPH1	P39956	796 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	SHR5	P41912	237 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	YNL140C	P53910	189 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	SOV1	Q04748	898 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	SAM4	Q08985	325 aa	Known RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	ZPS1	Q12512	249 aa		3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	RPL11B	Q3E757	174 aa	Predicted RBP	3.39	□□□□□ -1.87
YPR158C-D	YPR158C-D	VBA3	P25594	458 aa		3.38	□□□□□ -1.87
YPR158C-D	YPR158C-D	RPB9	P27999	122 aa		3.38	□□□□□ -1.87
YPR158C-D	YPR158C-D	ZTA1	P38230	334 aa	Known RBP	3.38	□□□□□ -1.87
YPR158C-D	YPR158C-D	YHL008C	P38750	627 aa		3.38	□□□□□ -1.87
YPR158C-D	YPR158C-D	AXL2	P38928	823 aa		3.38	□□□□□ -1.87
YPR158C-D	YPR158C-D	LYS9	P38999	446 aa		3.38	□□□□□ -1.87
YPR158C-D	YPR158C-D	VRG4	P40107	337 aa		3.38	□□□□□ -1.87
YPR158C-D	YPR158C-D	MPH1	P40562	993 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms