RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W ENT4Q07872 247 aa1.81□□□□□ -2.12
YOP1YPR028W YPL272CQ08984 517 aa1.81□□□□□ -2.12
YOP1YPR028W ARP6Q12509 438 aa1.81□□□□□ -2.12
YOP1YPR028W ENT1Q12518 454 aa1.81□□□□□ -2.12
YOP1YPR028W SEM1O94742 89 aa1.8□□□□□ -2.12
YOP1YPR028W RPL19AP0CX82 189 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W RPL19BP0CX83 189 aaPredicted RBP1.8□□□□□ -2.12
YOP1YPR028W MTF1P14908 341 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W KGD1P20967 1014 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W SNC1P31109 117 aa1.8□□□□□ -2.12
YOP1YPR028W SYN8P31377 255 aa1.8□□□□□ -2.12
YOP1YPR028W MSN2P33748 704 aa1.8□□□□□ -2.12
YOP1YPR028W YNK1P36010 153 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W MUD2P36084 527 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W NOP4P37838 685 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W ROT2P38138 954 aa1.8□□□□□ -2.12
YOP1YPR028W MAL33P38157 468 aa1.8□□□□□ -2.12
YOP1YPR028W NOP16P40007 231 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W AXL1P40851 1208 aa1.8□□□□□ -2.12
YOP1YPR028W LYS14P40971 790 aa1.8□□□□□ -2.12
YOP1YPR028W RTT101P47050 842 aa1.8□□□□□ -2.12
YOP1YPR028W DIA3P52290 468 aa1.8□□□□□ -2.12
YOP1YPR028W ERG26P53199 349 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W SAM50P53969 484 aa1.8□□□□□ -2.12
YOP1YPR028W YSA1Q01976 231 aa1.8□□□□□ -2.12
YOP1YPR028W VIP1Q06685 1146 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W GRC3Q07845 632 aa1.8□□□□□ -2.12
YOP1YPR028W TEN1Q07921 160 aa1.8□□□□□ -2.12
YOP1YPR028W THI20Q08224 551 aa1.8□□□□□ -2.12
YOP1YPR028W ETT1Q08421 412 aaKnown RBP1.8□□□□□ -2.12
YOP1YPR028W YDR056CQ12025 205 aa1.8□□□□□ -2.12
YOP1YPR028W HUA2Q12134 243 aa1.8□□□□□ -2.12
YOP1YPR028W ARG81P05085 880 aa1.79□□□□□ -2.12
YOP1YPR028W SEC53P07283 254 aaKnown RBP1.79□□□□□ -2.12
YOP1YPR028W TYR1P20049 452 aa1.79□□□□□ -2.12
YOP1YPR028W YCK1P23291 538 aa1.79□□□□□ -2.12
YOP1YPR028W NDC1P32500 655 aa1.79□□□□□ -2.12
YOP1YPR028W PAH1P32567 862 aa1.79□□□□□ -2.12
YOP1YPR028W SAC6P32599 642 aaKnown RBP1.79□□□□□ -2.12
YOP1YPR028W PTR2P32901 601 aa1.79□□□□□ -2.12
YOP1YPR028W AUR1P36107 401 aaPredicted RBP1.79□□□□□ -2.12
YOP1YPR028W LAG1P38703 411 aa1.79□□□□□ -2.12
YOP1YPR028W DBP8P38719 431 aa1.79□□□□□ -2.12
YOP1YPR028W NAB3P38996 802 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12 RIP-Chip
YOP1YPR028W COS10P52924 374 aa1.79□□□□□ -2.12
YOP1YPR028W RSM23Q01163 450 aa1.79□□□□□ -2.12
YOP1YPR028W YVH1Q02256 364 aaKnown RBP1.79□□□□□ -2.12
YOP1YPR028W YPL014WQ02606 381 aa1.79□□□□□ -2.12
YOP1YPR028W MSC1Q03104 513 aa1.79□□□□□ -2.12
YOP1YPR028W YKU80Q04437 629 aa1.79□□□□□ -2.12
YOP1YPR028W ECM30Q06673 1274 aa1.79□□□□□ -2.12
YOP1YPR028W SSK1Q07084 712 aa1.79□□□□□ -2.12
YOP1YPR028W BUD21Q08492 214 aaPredicted RBP1.79□□□□□ -2.12
YOP1YPR028W LEU9Q12166 604 aaKnown RBP1.79□□□□□ -2.12
YOP1YPR028W NCE102Q12207 173 aaRIP-Chip data1.79□□□□□ -2.12not detected
YOP1YPR028W NOP58Q12499 511 aaKnown RBP1.79□□□□□ -2.12
YOP1YPR028W YBR126W-AQ8TGU7 68 aa1.79□□□□□ -2.12
YOP1YPR028W KAR3P17119 729 aa1.78□□□□□ -2.12
YOP1YPR028W AAC3P18238 307 aa1.78□□□□□ -2.12
YOP1YPR028W BUD5P25300 642 aaPredicted RBP1.78□□□□□ -2.12
YOP1YPR028W PUP3P25451 205 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W YIH1P25637 258 aa1.78□□□□□ -2.12
YOP1YPR028W CMK1P27466 446 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W SIP2P34164 415 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W ECM15P35195 104 aa1.78□□□□□ -2.12
YOP1YPR028W FLC2P39719 783 aa1.78□□□□□ -2.12
YOP1YPR028W YTA12P40341 825 aa1.78□□□□□ -2.12
YOP1YPR028W RPR2P40571 144 aa1.78□□□□□ -2.12
YOP1YPR028W PTR3P43606 678 aa1.78□□□□□ -2.12
YOP1YPR028W FAR3P46671 204 aa1.78□□□□□ -2.12
YOP1YPR028W SDT1P53078 280 aa1.78□□□□□ -2.12
YOP1YPR028W DUO1P53168 247 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W DRN1P53255 507 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W YGR127WP53275 312 aa1.78□□□□□ -2.12
YOP1YPR028W SMM1P53720 384 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W EFM6P53970 246 aa1.78□□□□□ -2.12
YOP1YPR028W RHO4Q00246 291 aa1.78□□□□□ -2.12
YOP1YPR028W YML037CQ03703 340 aa1.78□□□□□ -2.12
YOP1YPR028W BUD22Q04347 519 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W ERP1Q05359 219 aaKnown RBP1.78□□□□□ -2.12
YOP1YPR028W NMD4Q12129 218 aa1.78□□□□□ -2.12
YOP1YPR028W SPE4Q12455 300 aa1.78□□□□□ -2.12
YOP1YPR028W MF(ALPHA)1P01149 165 aa1.77□□□□□ -2.13
YOP1YPR028W ARD1P07347 238 aaPredicted RBP1.77□□□□□ -2.13
YOP1YPR028W SEC62P21825 274 aa1.77□□□□□ -2.13
YOP1YPR028W BOS1P25385 244 aa1.77□□□□□ -2.13
YOP1YPR028W POL4P25615 582 aa1.77□□□□□ -2.13
YOP1YPR028W IMP2'P32351 346 aa1.77□□□□□ -2.13
YOP1YPR028W SSE2P32590 693 aaKnown RBP1.77□□□□□ -2.13
YOP1YPR028W VPS17P32913 551 aa1.77□□□□□ -2.13
YOP1YPR028W SWE1P32944 819 aa1.77□□□□□ -2.13
YOP1YPR028W YKL100CP34248 587 aa1.77□□□□□ -2.13
YOP1YPR028W NUP133P36161 1157 aa1.77□□□□□ -2.13
YOP1YPR028W TIF5P38431 405 aaKnown RBP1.77□□□□□ -2.13
YOP1YPR028W VPS52P39904 641 aa1.77□□□□□ -2.13
YOP1YPR028W AFG3P39925 761 aa1.77□□□□□ -2.13
YOP1YPR028W CSM2P40465 213 aa1.77□□□□□ -2.13
YOP1YPR028W IDP2P41939 412 aa1.77□□□□□ -2.13
YOP1YPR028W UPF3P48412 387 aaKnown RBP1.77□□□□□ -2.13
YOP1YPR028W APT1P49435 187 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms