RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	MNT3	P40549	630 aa		4.98	□□□□□ -1.61
COT1	YOR316C	SPG5	P42933	373 aa		4.98	□□□□□ -1.61
COT1	YOR316C	RPS10B	P46784	105 aa	Known RBP	4.98	□□□□□ -1.61
COT1	YOR316C	RPC17	P47076	161 aa		4.98	□□□□□ -1.61
COT1	YOR316C	RFX1	P48743	811 aa		4.98	□□□□□ -1.61
COT1	YOR316C	YML6	P51998	286 aa		4.98	□□□□□ -1.61
COT1	YOR316C	ELP3	Q02908	557 aa	Known RBP	4.98	□□□□□ -1.61
COT1	YOR316C	MTQ2	Q03920	221 aa	Predicted RBP	4.98	□□□□□ -1.61
COT1	YOR316C	SIZ1	Q04195	904 aa		4.98	□□□□□ -1.61
COT1	YOR316C	UFO1	Q04511	668 aa		4.98	□□□□□ -1.61
COT1	YOR316C	XYL2	Q07993	356 aa		4.98	□□□□□ -1.61
COT1	YOR316C	RPS10A	Q08745	105 aa	Predicted RBP	4.98	□□□□□ -1.61
COT1	YOR316C	GPM3	Q12326	303 aa		4.98	□□□□□ -1.61
COT1	YOR316C	YOL087C	Q99247	1116 aa		4.98	□□□□□ -1.61
COT1	YOR316C	RPS13	P05756	151 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	PRP6	P19735	899 aa	Predicted RBP	4.97	□□□□□ -1.61
COT1	YOR316C	SFL1	P20134	766 aa		4.97	□□□□□ -1.61
COT1	YOR316C	SEC62	P21825	274 aa		4.97	□□□□□ -1.61
COT1	YOR316C	MVD1	P32377	396 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	SEF1	P34228	1148 aa		4.97	□□□□□ -1.61
COT1	YOR316C	BYE1	P36106	594 aa		4.97	□□□□□ -1.61
COT1	YOR316C	SRP68	P38687	599 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	DIA4	P38705	446 aa	Predicted RBP	4.97	□□□□□ -1.61
COT1	YOR316C	AIM18	P38884	321 aa		4.97	□□□□□ -1.61
COT1	YOR316C	EDC3	P39998	551 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	BRO1	P48582	844 aa		4.97	□□□□□ -1.61
COT1	YOR316C	RIM8	P53179	542 aa		4.97	□□□□□ -1.61
COT1	YOR316C	PBP1	P53297	722 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	BOP3	P53958	396 aa		4.97	□□□□□ -1.61
COT1	YOR316C	VPS9	P54787	451 aa		4.97	□□□□□ -1.61
COT1	YOR316C	SRP1	Q02821	542 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	MTG1	Q03151	367 aa	Predicted RBP	4.97	□□□□□ -1.61
COT1	YOR316C	VPS60	Q03390	229 aa		4.97	□□□□□ -1.61
COT1	YOR316C	PLB2	Q03674	706 aa		4.97	□□□□□ -1.61
COT1	YOR316C	INP2	Q03824	705 aa		4.97	□□□□□ -1.61
COT1	YOR316C	YPR114W	Q06107	315 aa		4.97	□□□□□ -1.61
COT1	YOR316C	GRC3	Q07845	632 aa		4.97	□□□□□ -1.61
COT1	YOR316C	EFG1	Q3E705	233 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	IZH4	Q99393	312 aa		4.97	□□□□□ -1.61
COT1	YOR316C	APA1	P16550	321 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	SCL1	P21243	252 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	MRPL8	P22353	238 aa		4.97	□□□□□ -1.61
COT1	YOR316C	ADY2	P25613	283 aa		4.97	□□□□□ -1.61
COT1	YOR316C	DBF20	P32328	564 aa		4.97	□□□□□ -1.61
COT1	YOR316C	CDC12	P32468	407 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	KAR9	P32526	644 aa		4.97	□□□□□ -1.61
COT1	YOR316C	PET127	P32606	800 aa		4.97	□□□□□ -1.61
COT1	YOR316C	TOD6	P34219	525 aa		4.97	□□□□□ -1.61
COT1	YOR316C	KAP104	P38217	918 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	BIT2	P38346	545 aa		4.97	□□□□□ -1.61
COT1	YOR316C	YHL041W	P38730	149 aa		4.97	□□□□□ -1.61
COT1	YOR316C	TIM17	P39515	158 aa		4.97	□□□□□ -1.61
COT1	YOR316C	MEF2	P39677	819 aa		4.97	□□□□□ -1.61
COT1	YOR316C	ALK1	P43633	760 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
COT1	YOR316C	CTK3	P46963	296 aa	Predicted RBP	4.97	□□□□□ -1.61
COT1	YOR316C	SET2	P46995	733 aa	Known RBP	4.97	□□□□□ -1.61
COT1	YOR316C	IKS1	P47042	667 aa		4.97	□□□□□ -1.61
COT1	YOR316C	ASK10	P48361	1146 aa		4.97	□□□□□ -1.61
COT1	YOR316C	SPT20	P50875	604 aa		4.97	□□□□□ -1.61
COT1	YOR316C	PCL10	P53124	433 aa		4.97	□□□□□ -1.61
COT1	YOR316C	GTF1	P53260	183 aa	Predicted RBP	4.97	□□□□□ -1.61
COT1	YOR316C	TEP1	P53916	434 aa		4.97	□□□□□ -1.61
COT1	YOR316C	SNP1	Q00916	300 aa	Predicted RBP	4.97	□□□□□ -1.61
COT1	YOR316C	ARG7	Q04728	441 aa		4.97	□□□□□ -1.61
COT1	YOR316C	AAD15	Q08361	143 aa		4.97	□□□□□ -1.61
COT1	YOR316C	AIM41	Q12032	185 aa		4.97	□□□□□ -1.61
COT1	YOR316C	YDR018C	Q12185	396 aa		4.97	□□□□□ -1.61
COT1	YOR316C	SOD2	P00447	233 aa		4.96	□□□□□ -1.62
COT1	YOR316C	PET111	P08468	800 aa		4.96	□□□□□ -1.62
COT1	YOR316C	MET16	P18408	261 aa	Predicted RBP	4.96	□□□□□ -1.62
COT1	YOR316C	MCM10	P32354	571 aa		4.96	□□□□□ -1.62
COT1	YOR316C	NTH1	P32356	751 aa		4.96	□□□□□ -1.62
COT1	YOR316C	SPR1	P32603	445 aa		4.96	□□□□□ -1.62
COT1	YOR316C	RAD5	P32849	1169 aa	Predicted RBP	4.96	□□□□□ -1.62
COT1	YOR316C	UBC6	P33296	250 aa	Predicted RBP	4.96	□□□□□ -1.62
COT1	YOR316C	CNS1	P33313	385 aa		4.96	□□□□□ -1.62
COT1	YOR316C	THI80	P35202	319 aa		4.96	□□□□□ -1.62
COT1	YOR316C	GIC1	P38785	314 aa		4.96	□□□□□ -1.62
COT1	YOR316C	MTG2	P38860	518 aa		4.96	□□□□□ -1.62
COT1	YOR316C	END3	P39013	349 aa		4.96	□□□□□ -1.62
COT1	YOR316C	CCT4	P39078	528 aa	Known RBP	4.96	□□□□□ -1.62
COT1	YOR316C	YEL028W	P39989	153 aa		4.96	□□□□□ -1.62
COT1	YOR316C	YMR134W	P40207	237 aa		4.96	□□□□□ -1.62
COT1	YOR316C	MND2	P40577	368 aa		4.96	□□□□□ -1.62
COT1	YOR316C	ZIM17	P42844	174 aa		4.96	□□□□□ -1.62
COT1	YOR316C	SNG1	P46950	547 aa		4.96	□□□□□ -1.62
COT1	YOR316C	HXT16	P47185	567 aa		4.96	□□□□□ -1.62
COT1	YOR316C	IPI3	P53877	555 aa		4.96	□□□□□ -1.62
COT1	YOR316C	RPL22B	P56628	122 aa	Known RBP	4.96	□□□□□ -1.62
COT1	YOR316C	DIG1	Q03063	452 aa	Known RBP	4.96	□□□□□ -1.62
COT1	YOR316C	YDR132C	Q03900	495 aa		4.96	□□□□□ -1.62
COT1	YOR316C	ARA2	Q04212	335 aa		4.96	□□□□□ -1.62
COT1	YOR316C	ECI1	Q05871	280 aa		4.96	□□□□□ -1.62
COT1	YOR316C	VPS68	Q12016	184 aa		4.96	□□□□□ -1.62
COT1	YOR316C	HBN1	Q96VH4	193 aa		4.96	□□□□□ -1.62
COT1	YOR316C	YCR015C	P25616	317 aa		4.95	□□□□□ -1.62
COT1	YOR316C	AAR2	P32357	355 aa	Predicted RBP	4.95	□□□□□ -1.62
COT1	YOR316C	RRP1	P35178	278 aa	Predicted RBP	4.95	□□□□□ -1.62
COT1	YOR316C	RRN3	P36070	627 aa		4.95	□□□□□ -1.62

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