RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W SNG1P46950 547 aa3.69□□□□□ -1.82
SMD2YLR275W RTT101P47050 842 aa3.69□□□□□ -1.82
SMD2YLR275W YDL186WP48568 277 aa3.69□□□□□ -1.82
SMD2YLR275W APT1P49435 187 aaKnown RBP3.69□□□□□ -1.82
SMD2YLR275W MEP3P53390 489 aa3.69□□□□□ -1.82
SMD2YLR275W SHR3Q02774 210 aa3.69□□□□□ -1.82
SMD2YLR275W MSC1Q03104 513 aa3.69□□□□□ -1.82
SMD2YLR275W YML037CQ03703 340 aa3.69□□□□□ -1.82
SMD2YLR275W BUD22Q04347 519 aaKnown RBP3.69□□□□□ -1.82
SMD2YLR275W LUC7Q07508 261 aaPredicted RBP3.69□□□□□ -1.82
SMD2YLR275W SET6Q12529 373 aa3.69□□□□□ -1.82
SMD2YLR275W PEP5P12868 1029 aa3.68□□□□□ -1.82
SMD2YLR275W KAR3P17119 729 aa3.68□□□□□ -1.82
SMD2YLR275W SGV1P23293 657 aaKnown RBP3.68□□□□□ -1.82
SMD2YLR275W CHS3P29465 1165 aa3.68□□□□□ -1.82
SMD2YLR275W SSE2P32590 693 aaKnown RBP3.68□□□□□ -1.82
SMD2YLR275W YBR144CP34215 104 aa3.68□□□□□ -1.82
SMD2YLR275W YBL029WP38201 376 aa3.68□□□□□ -1.82
SMD2YLR275W RPH1P39956 796 aa3.68□□□□□ -1.82
SMD2YLR275W YJL213WP40896 331 aa3.68□□□□□ -1.82
SMD2YLR275W LYS14P40971 790 aa3.68□□□□□ -1.82
SMD2YLR275W ERP1Q05359 219 aaKnown RBP3.68□□□□□ -1.82
SMD2YLR275W GDH1P07262 454 aaKnown RBP3.67□□□□□ -1.82
SMD2YLR275W APE1P14904 514 aa3.67□□□□□ -1.82
SMD2YLR275W SUI2P20459 304 aaKnown RBP3.67□□□□□ -1.82
SMD2YLR275W YCK1P23291 538 aa3.67□□□□□ -1.82
SMD2YLR275W SGF29P25554 259 aa3.67□□□□□ -1.82
SMD2YLR275W ATS1P31386 333 aa3.67□□□□□ -1.82
SMD2YLR275W SSH4P32343 579 aa3.67□□□□□ -1.82
SMD2YLR275W VPS52P39904 641 aa3.67□□□□□ -1.82
SMD2YLR275W AFG3P39925 761 aa3.67□□□□□ -1.82
SMD2YLR275W RPR2P40571 144 aa3.67□□□□□ -1.82
SMD2YLR275W YFR016CP43597 1233 aaKnown RBP3.67□□□□□ -1.82
SMD2YLR275W ALT2P52892 507 aa3.67□□□□□ -1.82
SMD2YLR275W YGR126WP53274 230 aa3.67□□□□□ -1.82
SMD2YLR275W SPE4Q12455 300 aa3.67□□□□□ -1.82
SMD2YLR275W CDC16P09798 840 aa3.66□□□□□ -1.82
SMD2YLR275W POL4P25615 582 aa3.66□□□□□ -1.82
SMD2YLR275W SPC110P32380 944 aa3.66□□□□□ -1.82
SMD2YLR275W YOX1P34161 385 aa3.66□□□□□ -1.82
SMD2YLR275W YBR139WP38109 508 aa3.66□□□□□ -1.82
SMD2YLR275W OSH3P38713 996 aaKnown RBP3.66□□□□□ -1.82
SMD2YLR275W CIN4P39110 191 aa3.66□□□□□ -1.82
SMD2YLR275W COS10P52924 374 aa3.66□□□□□ -1.82
SMD2YLR275W DSD1P53095 428 aa3.66□□□□□ -1.82
SMD2YLR275W BUD32P53323 261 aa3.66□□□□□ -1.82
SMD2YLR275W YKU80Q04437 629 aa3.66□□□□□ -1.82
SMD2YLR275W FMP40Q08968 688 aaPredicted RBP3.66□□□□□ -1.82
SMD2YLR275W YBR126W-AQ8TGU7 68 aa3.66□□□□□ -1.82
SMD2YLR275W CAR1P00812 333 aaKnown RBP3.65□□□□□ -1.83
SMD2YLR275W MCK1P21965 375 aaKnown RBP3.65□□□□□ -1.83
SMD2YLR275W AGA1P32323 725 aa3.65□□□□□ -1.83
SMD2YLR275W MCM10P32354 571 aa3.65□□□□□ -1.83
SMD2YLR275W UBP11P36026 717 aa3.65□□□□□ -1.83
SMD2YLR275W MTC4P38335 694 aaKnown RBP3.65□□□□□ -1.83
SMD2YLR275W YEL068CP39977 110 aa3.65□□□□□ -1.83
SMD2YLR275W YJR154WP47181 346 aa3.65□□□□□ -1.83
SMD2YLR275W LCL3P53153 274 aa3.65□□□□□ -1.83
SMD2YLR275W YDL057WQ07379 328 aa3.65□□□□□ -1.83
SMD2YLR275W TLG2Q08144 397 aa3.65□□□□□ -1.83
SMD2YLR275W NCE102Q12207 173 aaRIP-Chip data3.65□□□□□ -1.83not detected
SMD2YLR275W AMD1P15274 810 aaKnown RBP3.64□□□□□ -1.83
SMD2YLR275W YHR210CP38893 341 aa3.64□□□□□ -1.83
SMD2YLR275W DUO1P53168 247 aaKnown RBP3.64□□□□□ -1.83
SMD2YLR275W RLI1Q03195 608 aaKnown RBP3.64□□□□□ -1.83
SMD2YLR275W SYO1Q07395 620 aa3.64□□□□□ -1.83
SMD2YLR275W RSA1Q08932 381 aa3.64□□□□□ -1.83
SMD2YLR275W HUA2Q12134 243 aa3.64□□□□□ -1.83
SMD2YLR275W YDL009CQ12210 107 aa3.64□□□□□ -1.83
SMD2YLR275W AYT1Q12226 474 aa3.64□□□□□ -1.83
SMD2YLR275W NOP58Q12499 511 aaKnown RBP3.64□□□□□ -1.83
SMD2YLR275W RPL20AP0CX23 172 aaKnown RBP3.63□□□□□ -1.83
SMD2YLR275W RPL20BP0CX24 172 aaPredicted RBP3.63□□□□□ -1.83
SMD2YLR275W CBS2P14905 389 aa3.63□□□□□ -1.83
SMD2YLR275W MUD2P36084 527 aaKnown RBP3.63□□□□□ -1.83
SMD2YLR275W SDS24P38314 527 aa3.63□□□□□ -1.83
SMD2YLR275W SCD6P45978 349 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SMD2YLR275W YJL132WP47014 750 aa3.63□□□□□ -1.83
SMD2YLR275W BOR1P53838 576 aa3.63□□□□□ -1.83
SMD2YLR275W BNA5Q05979 453 aa3.63□□□□□ -1.83
SMD2YLR275W YOR365CQ08844 703 aa3.63□□□□□ -1.83
SMD2YLR275W SGS1P35187 1447 aa3.62□□□□□ -1.83
SMD2YLR275W ART10P18634 518 aaKnown RBP3.62□□□□□ -1.83
SMD2YLR275W TIF3P34167 436 aaKnown RBP3.62□□□□□ -1.83
SMD2YLR275W AVT5P38176 459 aa3.62□□□□□ -1.83
SMD2YLR275W YBP1P38315 674 aa3.62□□□□□ -1.83
SMD2YLR275W CCT6P39079 546 aa3.62□□□□□ -1.83
SMD2YLR275W NPR2P39923 615 aa3.62□□□□□ -1.83
SMD2YLR275W DRN1P53255 507 aaKnown RBP3.62□□□□□ -1.83
SMD2YLR275W NGL3Q03210 505 aa3.62□□□□□ -1.83
SMD2YLR275W SLD5Q03406 294 aa3.62□□□□□ -1.83
SMD2YLR275W YLL056CQ12177 298 aa3.62□□□□□ -1.83
SMD2YLR275W RAD52P06778 471 aaKnown RBP3.61□□□□□ -1.83
SMD2YLR275W PEP4P07267 405 aaKnown RBP3.61□□□□□ -1.83
SMD2YLR275W MRP13P12686 339 aa3.61□□□□□ -1.83
SMD2YLR275W YCR007CP25354 239 aa3.61□□□□□ -1.83
SMD2YLR275W SAC6P32599 642 aaKnown RBP3.61□□□□□ -1.83
SMD2YLR275W FRE1P32791 686 aa3.61□□□□□ -1.83
SMD2YLR275W IVY1Q04934 453 aa3.61□□□□□ -1.83
SMD2YLR275W MRPL51Q06090 140 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms