RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W YBR284WP38150 797 aa7.31□□□□□ -1.24
SNF7YLR025W ECM13P38195 257 aa7.31□□□□□ -1.24
SNF7YLR025W ETP1P38748 585 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W SFB3P38810 929 aa7.31□□□□□ -1.24
SNF7YLR025W CYC2P38909 366 aa7.31□□□□□ -1.24
SNF7YLR025W NPT1P39683 429 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W UBP7P40453 1071 aa7.31□□□□□ -1.24
SNF7YLR025W MPH1P40562 993 aa7.31□□□□□ -1.24
SNF7YLR025W GCD14P46959 383 aaPredicted RBP7.31□□□□□ -1.24
SNF7YLR025W MPS3P47069 682 aa7.31□□□□□ -1.24
SNF7YLR025W NOP9P47077 666 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W MTR3P48240 250 aaPredicted RBP7.31□□□□□ -1.24
SNF7YLR025W UPF3P48412 387 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W SAP4P53036 818 aa7.31□□□□□ -1.24
SNF7YLR025W CLD1P53264 445 aa7.31□□□□□ -1.24
SNF7YLR025W TRM112P53738 135 aaPredicted RBP7.31□□□□□ -1.24
SNF7YLR025W YNR063WP53749 607 aa7.31□□□□□ -1.24
SNF7YLR025W IBD2P53892 351 aa7.31□□□□□ -1.24
SNF7YLR025W NAN1Q02931 896 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W HSP31Q04432 237 aa7.31□□□□□ -1.24
SNF7YLR025W RSA3Q05942 220 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W MRI1Q06489 411 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W YDL121CQ07541 149 aa7.31□□□□□ -1.24
SNF7YLR025W YLR012CQ07927 99 aa7.31□□□□□ -1.24
SNF7YLR025W YEH2Q07950 538 aa7.31□□□□□ -1.24
SNF7YLR025W UBR2Q07963 1872 aa7.31□□□□□ -1.24
SNF7YLR025W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
SNF7YLR025W HUA2Q12134 243 aa7.31□□□□□ -1.24
SNF7YLR025W PSY3Q12318 242 aa7.31□□□□□ -1.24
SNF7YLR025W DBP10Q12389 995 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W TY1A-NL1Q12391 440 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W AHA1Q12449 350 aaKnown RBP7.31□□□□□ -1.24
SNF7YLR025W THP2O13539 261 aaKnown RBP7.3□□□□□ -1.24
SNF7YLR025W ATP2P00830 511 aaKnown RBP7.3□□□□□ -1.24
SNF7YLR025W AI3P03877 415 aa7.3□□□□□ -1.24
SNF7YLR025W SUI3P09064 285 aaKnown RBP7.3□□□□□ -1.24
SNF7YLR025W COS2P0CX12 379 aa7.3□□□□□ -1.24
SNF7YLR025W COS3P0CX13 379 aa7.3□□□□□ -1.24
SNF7YLR025W SST2P11972 698 aaKnown RBP7.3□□□□□ -1.24
SNF7YLR025W TYR1P20049 452 aa7.3□□□□□ -1.24
SNF7YLR025W CLN2P20438 545 aa7.3□□□□□ -1.24
SNF7YLR025W RPL5P26321 297 aaKnown RBP7.3□□□□□ -1.24
SNF7YLR025W MF(ALPHA)2P32435 120 aa7.3□□□□□ -1.24
SNF7YLR025W SSE2P32590 693 aaKnown RBP7.3□□□□□ -1.24
SNF7YLR025W SGE1P33335 543 aa7.3□□□□□ -1.24
SNF7YLR025W STB6P36085 766 aa7.3□□□□□ -1.24
SNF7YLR025W SLX1P38324 304 aa7.3□□□□□ -1.24
SNF7YLR025W BTT1P40314 149 aaPredicted RBP7.3□□□□□ -1.24
SNF7YLR025W ALG8P40351 577 aa7.3□□□□□ -1.24
SNF7YLR025W COA1P40452 197 aa7.3□□□□□ -1.24
SNF7YLR025W SLS1P42900 643 aa7.3□□□□□ -1.24
SNF7YLR025W COS4P43542 379 aa7.3□□□□□ -1.24
SNF7YLR025W DCP2P53550 970 aaKnown RBP7.3□□□□□ -1.24
SNF7YLR025W ASI2P53895 289 aa7.3□□□□□ -1.24
SNF7YLR025W GLO2Q05584 274 aa7.3□□□□□ -1.24
SNF7YLR025W BLS1Q06071 122 aa7.3□□□□□ -1.24
SNF7YLR025W UAF30Q08747 228 aa7.3□□□□□ -1.24
SNF7YLR025W YPL247CQ12523 523 aa7.3□□□□□ -1.24
SNF7YLR025W YPR053CQ6Q5F3 151 aa7.3□□□□□ -1.24
SNF7YLR025W SCH9P11792 824 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W PDE1P22434 369 aa7.29□□□□□ -1.24
SNF7YLR025W AAT2P23542 418 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W ERG6P25087 383 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W PGS1P25578 521 aa7.29□□□□□ -1.24
SNF7YLR025W RSC6P25632 483 aa7.29□□□□□ -1.24
SNF7YLR025W BUB2P26448 306 aaPredicted RBP7.29□□□□□ -1.24
SNF7YLR025W YKL100CP34248 587 aa7.29□□□□□ -1.24
SNF7YLR025W SRP72P38688 640 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W MUP3P38734 546 aa7.29□□□□□ -1.24
SNF7YLR025W NEM1P38757 446 aa7.29□□□□□ -1.24
SNF7YLR025W NUP60P39705 539 aa7.29□□□□□ -1.24
SNF7YLR025W MMF1P40185 145 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W CAB2P40506 365 aa7.29□□□□□ -1.24
SNF7YLR025W SNL1P40548 159 aa7.29□□□□□ -1.24
SNF7YLR025W OPT1P40897 799 aa7.29□□□□□ -1.24
SNF7YLR025W IMA1P53051 589 aa7.29□□□□□ -1.24
SNF7YLR025W STR3P53101 465 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W GND2P53319 492 aa7.29□□□□□ -1.24
SNF7YLR025W NCE103P53615 221 aa7.29□□□□□ -1.24
SNF7YLR025W DSL1P53847 754 aa7.29□□□□□ -1.24
SNF7YLR025W SPO20Q04359 397 aa7.29□□□□□ -1.24
SNF7YLR025W GGA1Q06336 557 aa7.29□□□□□ -1.24
SNF7YLR025W NDL1Q06568 189 aa7.29□□□□□ -1.24
SNF7YLR025W CDA1Q06702 301 aa7.29□□□□□ -1.24
SNF7YLR025W YOL019WQ08157 551 aa7.29□□□□□ -1.24
SNF7YLR025W HRK1Q08732 759 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W YLR049CQ12110 428 aa7.29□□□□□ -1.24
SNF7YLR025W YDR215CQ12240 137 aa7.29□□□□□ -1.24
SNF7YLR025W NDJ1Q12366 352 aa7.29□□□□□ -1.24
SNF7YLR025W LPX1Q12405 387 aaKnown RBP7.29□□□□□ -1.24
SNF7YLR025W SEM1O94742 89 aa7.28□□□□□ -1.24
SNF7YLR025W FBA1P14540 359 aaKnown RBP7.28□□□□□ -1.24
SNF7YLR025W AMD1P15274 810 aaKnown RBP7.28□□□□□ -1.24
SNF7YLR025W DBR1P24309 405 aaKnown RBP7.28□□□□□ -1.24
SNF7YLR025W RPS5P26783 225 aaKnown RBP7.28□□□□□ -1.24
SNF7YLR025W PEX6P33760 1030 aa7.28□□□□□ -1.24
SNF7YLR025W SIF2P38262 535 aa7.28□□□□□ -1.24
SNF7YLR025W IMA5P40884 581 aa7.28□□□□□ -1.24
SNF7YLR025W BUD13P46947 266 aaPredicted RBP7.28□□□□□ -1.24
SNF7YLR025W SIP4P46954 829 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms