RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W NOP58Q12499 511 aaKnown RBP3.35□□□□□ -1.87
CAP1YKL007W MRS3P10566 314 aa3.34□□□□□ -1.87
CAP1YKL007W CPR3P25719 182 aa3.34□□□□□ -1.87
CAP1YKL007W NDC1P32500 655 aa3.34□□□□□ -1.87
CAP1YKL007W CIN4P39110 191 aa3.34□□□□□ -1.87
CAP1YKL007W AFG3P39925 761 aa3.34□□□□□ -1.87
CAP1YKL007W SNG1P46950 547 aa3.34□□□□□ -1.87
CAP1YKL007W APT1P49435 187 aaKnown RBP3.34□□□□□ -1.87
CAP1YKL007W YGR126WP53274 230 aa3.34□□□□□ -1.87
CAP1YKL007W MEP3P53390 489 aa3.34□□□□□ -1.87
CAP1YKL007W YPL272CQ08984 517 aa3.34□□□□□ -1.87
CAP1YKL007W YBR126W-AQ8TGU7 68 aa3.34□□□□□ -1.87
CAP1YKL007W CAR1P00812 333 aaKnown RBP3.33□□□□□ -1.88
CAP1YKL007W RPL15AP05748 204 aaKnown RBP3.33□□□□□ -1.88
CAP1YKL007W CDC16P09798 840 aa3.33□□□□□ -1.88
CAP1YKL007W YCK1P23291 538 aa3.33□□□□□ -1.88
CAP1YKL007W SYN8P31377 255 aa3.33□□□□□ -1.88
CAP1YKL007W SAC6P32599 642 aaKnown RBP3.33□□□□□ -1.88
CAP1YKL007W PTR2P32901 601 aa3.33□□□□□ -1.88
CAP1YKL007W SIP2P34164 415 aaKnown RBP3.33□□□□□ -1.88
CAP1YKL007W YJL132WP47014 750 aa3.33□□□□□ -1.88
CAP1YKL007W RTT101P47050 842 aa3.33□□□□□ -1.88
CAP1YKL007W GIS2P53849 153 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
CAP1YKL007W YML037CQ03703 340 aa3.33□□□□□ -1.88
CAP1YKL007W KGD1P20967 1014 aaKnown RBP3.32□□□□□ -1.88
CAP1YKL007W RPS2P25443 254 aaKnown RBP3.32□□□□□ -1.88
CAP1YKL007W SGF29P25554 259 aa3.32□□□□□ -1.88
CAP1YKL007W MCM10P32354 571 aa3.32□□□□□ -1.88
CAP1YKL007W NOP4P37838 685 aaKnown RBP3.32□□□□□ -1.88
CAP1YKL007W OSH3P38713 996 aaKnown RBP3.32□□□□□ -1.88
CAP1YKL007W YJL213WP40896 331 aa3.32□□□□□ -1.88
CAP1YKL007W LYS14P40971 790 aa3.32□□□□□ -1.88
CAP1YKL007W YDL186WP48568 277 aa3.32□□□□□ -1.88
CAP1YKL007W SET6Q12529 373 aa3.32□□□□□ -1.88
CAP1YKL007W GDH1P07262 454 aaKnown RBP3.31□□□□□ -1.88
CAP1YKL007W APE1P14904 514 aa3.31□□□□□ -1.88
CAP1YKL007W ART10P18634 518 aaKnown RBP3.31□□□□□ -1.88
CAP1YKL007W SPC110P32380 944 aa3.31□□□□□ -1.88
CAP1YKL007W YHR210CP38893 341 aa3.31□□□□□ -1.88
CAP1YKL007W FLC2P39719 783 aa3.31□□□□□ -1.88
CAP1YKL007W RPH1P39956 796 aa3.31□□□□□ -1.88
CAP1YKL007W YEL068CP39977 110 aa3.31□□□□□ -1.88
CAP1YKL007W ALK1P43633 760 aaKnown RBP3.31□□□□□ -1.88
CAP1YKL007W YJR154WP47181 346 aa3.31□□□□□ -1.88
CAP1YKL007W VID30P53076 958 aa3.31□□□□□ -1.88
CAP1YKL007W DSD1P53095 428 aa3.31□□□□□ -1.88
CAP1YKL007W YKU80Q04437 629 aa3.31□□□□□ -1.88
CAP1YKL007W NMD4Q12129 218 aa3.31□□□□□ -1.88
CAP1YKL007W SPE4Q12455 300 aa3.31□□□□□ -1.88
CAP1YKL007W SEC53P07283 254 aaKnown RBP3.3□□□□□ -1.88
CAP1YKL007W KAR3P17119 729 aa3.3□□□□□ -1.88
CAP1YKL007W EXO70P19658 623 aa3.3□□□□□ -1.88
CAP1YKL007W POL4P25615 582 aa3.3□□□□□ -1.88
CAP1YKL007W LOS1P33418 1100 aaPredicted RBP3.3□□□□□ -1.88
CAP1YKL007W UBP11P36026 717 aa3.3□□□□□ -1.88
CAP1YKL007W NPR2P39923 615 aa3.3□□□□□ -1.88
CAP1YKL007W YFR016CP43597 1233 aaKnown RBP3.3□□□□□ -1.88
CAP1YKL007W DUO1P53168 247 aaKnown RBP3.3□□□□□ -1.88
CAP1YKL007W MSC1Q03104 513 aa3.3□□□□□ -1.88
CAP1YKL007W YMR087WQ04299 284 aa3.3□□□□□ -1.88
CAP1YKL007W SYO1Q07395 620 aa3.3□□□□□ -1.88
CAP1YKL007W YEH1Q07804 573 aa3.3□□□□□ -1.88
CAP1YKL007W YDL009CQ12210 107 aa3.3□□□□□ -1.88
CAP1YKL007W SEM1O94742 89 aa3.29□□□□□ -1.88
CAP1YKL007W ATR1P13090 542 aa3.29□□□□□ -1.88
CAP1YKL007W CBS2P14905 389 aa3.29□□□□□ -1.88
CAP1YKL007W YCR007CP25354 239 aa3.29□□□□□ -1.88
CAP1YKL007W SHP1P34223 423 aa3.29□□□□□ -1.88
CAP1YKL007W SEF1P34228 1148 aa3.29□□□□□ -1.88
CAP1YKL007W YHR218WP38899 603 aa3.29□□□□□ -1.88
CAP1YKL007W KRE9P39005 276 aa3.29□□□□□ -1.88
CAP1YKL007W ALG5P40350 334 aa3.29□□□□□ -1.88
CAP1YKL007W COS10P52924 374 aa3.29□□□□□ -1.88
CAP1YKL007W MRPL51Q06090 140 aaPredicted RBP3.29□□□□□ -1.88
CAP1YKL007W VPS74Q06385 345 aa3.29□□□□□ -1.88
CAP1YKL007W YDL057WQ07379 328 aa3.29□□□□□ -1.88
CAP1YKL007W YOR365CQ08844 703 aa3.29□□□□□ -1.88
CAP1YKL007W NCE102Q12207 173 aaRIP-Chip data3.29□□□□□ -1.88not detected
CAP1YKL007W LSP1Q12230 341 aaKnown RBP3.29□□□□□ -1.88
CAP1YKL007W BRR1Q99177 341 aaPredicted RBP3.29□□□□□ -1.88
CAP1YKL007W RPL20AP0CX23 172 aaKnown RBP3.28□□□□□ -1.88
CAP1YKL007W RPL20BP0CX24 172 aaPredicted RBP3.28□□□□□ -1.88
CAP1YKL007W AMD1P15274 810 aaKnown RBP3.28□□□□□ -1.88
CAP1YKL007W MCK1P21965 375 aaKnown RBP3.28□□□□□ -1.88
CAP1YKL007W PAP1P29468 568 aaKnown RBP3.28□□□□□ -1.88
CAP1YKL007W MUD2P36084 527 aaKnown RBP3.28□□□□□ -1.88
CAP1YKL007W YBR139WP38109 508 aa3.28□□□□□ -1.88
CAP1YKL007W VPS52P39904 641 aa3.28□□□□□ -1.88
CAP1YKL007W NOP16P40007 231 aaKnown RBP3.28□□□□□ -1.88
CAP1YKL007W RPR2P40571 144 aa3.28□□□□□ -1.88
CAP1YKL007W YGR066CP53242 292 aa3.28□□□□□ -1.88
CAP1YKL007W BUD32P53323 261 aa3.28□□□□□ -1.88
CAP1YKL007W TOF2Q02208 771 aa3.28□□□□□ -1.88
CAP1YKL007W BNA5Q05979 453 aa3.28□□□□□ -1.88
CAP1YKL007W RCN2Q12044 265 aa3.28□□□□□ -1.88
CAP1YKL007W ENT1Q12518 454 aa3.28□□□□□ -1.88
CAP1YKL007W HSH49Q99181 213 aaPredicted RBP3.28□□□□□ -1.88
CAP1YKL007W PAH1P32567 862 aa3.27□□□□□ -1.89
CAP1YKL007W UTR4P32626 227 aa3.27□□□□□ -1.89
CAP1YKL007W MTC4P38335 694 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms