RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W SPO71Q03868 1245 aa2.41□□□□□ -2.02
TRA1YHR099W ARP10Q04549 284 aa2.41□□□□□ -2.02
TRA1YHR099W YCR075W-AQ3E830 75 aa2.41□□□□□ -2.02
TRA1YHR099W HXK1P04806 485 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W RCR1P38212 213 aa2.41□□□□□ -2.02
TRA1YHR099W CTK2P46962 323 aa2.41□□□□□ -2.02
TRA1YHR099W EMC2P47133 292 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W PEX8P53248 589 aa2.41□□□□□ -2.02
TRA1YHR099W RMI1Q02685 241 aa2.41□□□□□ -2.02
TRA1YHR099W FAL1Q12099 399 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W YPL245WQ12179 454 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W ROM2P51862 1356 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W TRP4P07285 380 aaPredicted RBP2.41□□□□□ -2.02
TRA1YHR099W SSH4P32343 579 aa2.41□□□□□ -2.02
TRA1YHR099W YET1P35723 206 aa2.41□□□□□ -2.02
TRA1YHR099W PPS1P38148 807 aa2.41□□□□□ -2.02
TRA1YHR099W ALG3P38179 458 aa2.41□□□□□ -2.02
TRA1YHR099W HIS2P38635 335 aa2.41□□□□□ -2.02
TRA1YHR099W PAC2P39937 518 aa2.41□□□□□ -2.02
TRA1YHR099W YER186CP40101 306 aa2.41□□□□□ -2.02
TRA1YHR099W YJL043WP47053 257 aa2.41□□□□□ -2.02
TRA1YHR099W GCV2P49095 1034 aa2.41□□□□□ -2.02
TRA1YHR099W SDT1P53078 280 aa2.41□□□□□ -2.02
TRA1YHR099W YDR131CQ03899 556 aa2.41□□□□□ -2.02
TRA1YHR099W RRP45Q05636 305 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W TRM8Q12009 286 aa2.41□□□□□ -2.02
TRA1YHR099W PUS9Q12069 462 aa2.41□□□□□ -2.02
TRA1YHR099W RPN6Q12377 434 aa2.41□□□□□ -2.02
TRA1YHR099W CIT1P00890 479 aa2.41□□□□□ -2.02
TRA1YHR099W CDC9P04819 755 aa2.41□□□□□ -2.02
TRA1YHR099W SAM1P10659 382 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W GCN3P14741 305 aa2.41□□□□□ -2.02
TRA1YHR099W CKA1P15790 372 aa2.41□□□□□ -2.02
TRA1YHR099W FCY2P17064 533 aa2.41□□□□□ -2.02
TRA1YHR099W TYE7P33122 291 aaPredicted RBP2.41□□□□□ -2.02
TRA1YHR099W TOM20P35180 183 aa2.41□□□□□ -2.02
TRA1YHR099W PRE3P38624 215 aa2.41□□□□□ -2.02
TRA1YHR099W GTF1P53260 183 aaPredicted RBP2.41□□□□□ -2.02
TRA1YHR099W YML037CQ03703 340 aa2.41□□□□□ -2.02
TRA1YHR099W CWC15Q03772 175 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W ATC1Q04005 294 aa2.41□□□□□ -2.02
TRA1YHR099W RSC2Q06488 889 aa2.41□□□□□ -2.02
TRA1YHR099W MCP2Q06567 569 aa2.41□□□□□ -2.02
TRA1YHR099W PUN1Q06991 263 aa2.41□□□□□ -2.02
TRA1YHR099W RTK1Q12100 620 aaPredicted RBP2.41□□□□□ -2.02
TRA1YHR099W RPL22AP05749 121 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W RFA1P22336 621 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W PPH22P23595 377 aa2.41□□□□□ -2.02
TRA1YHR099W NUP2P32499 720 aa2.41□□□□□ -2.02
TRA1YHR099W ABD1P32783 436 aaPredicted RBP2.41□□□□□ -2.02
TRA1YHR099W LOT5P34234 306 aa2.41□□□□□ -2.02
TRA1YHR099W YHR045WP38775 560 aa2.41□□□□□ -2.02
TRA1YHR099W UBP5P39944 805 aa2.41□□□□□ -2.02
TRA1YHR099W LYS14P40971 790 aa2.41□□□□□ -2.02
TRA1YHR099W AZR1P50080 613 aa2.41□□□□□ -2.02
TRA1YHR099W MPP6P53725 186 aaPredicted RBP2.41□□□□□ -2.02
TRA1YHR099W HRD3Q05787 833 aa2.41□□□□□ -2.02
TRA1YHR099W MRPL35Q06678 367 aa2.41□□□□□ -2.02
TRA1YHR099W ALR1Q08269 859 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-DR4O74302 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-HP0C2I4 478 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W TY1A-LR4P0C2I8 440 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W TY1A-AP0CX57 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-PR1P0CX58 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-ORP0CX59 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-PR2P0CX60 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-DR5P0CX65 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-ER2P0CX66 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-GR3P0CX67 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-LR1P0CX68 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-MR2P0CX69 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-DR6P0CX70 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-ER1P0CX71 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-LR2P0CX72 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-PLP0CX73 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-JR1P0CX74 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-LR3P0CX75 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-ML2P0CX76 440 aa2.41□□□□□ -2.02
TRA1YHR099W PMT2P31382 759 aa2.41□□□□□ -2.02
TRA1YHR099W DBF20P32328 564 aa2.41□□□□□ -2.02
TRA1YHR099W SKP2P42843 763 aa2.41□□□□□ -2.02
TRA1YHR099W RTT101P47050 842 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-JR2P47099 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-DR1Q03856 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-ML1Q04706 440 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W ATG39Q06159 398 aa2.41□□□□□ -2.02
TRA1YHR099W YLR326WQ06170 240 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W TY1A-GR1Q12085 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-DR3Q12441 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-NL2Q12470 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-GR2Q12485 440 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W TY1A-OLQ92392 440 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W BI4P03879 638 aa2.4□□□□□ -2.02
TRA1YHR099W ANR2P36090 516 aaPredicted RBP2.4□□□□□ -2.02
TRA1YHR099W NTR2P36118 322 aaPredicted RBP2.4□□□□□ -2.02
TRA1YHR099W POP7P38291 140 aa2.4□□□□□ -2.02
TRA1YHR099W CUE1P38428 203 aa2.4□□□□□ -2.02
TRA1YHR099W MSG5P38590 489 aa2.4□□□□□ -2.02
TRA1YHR099W CRP1P38845 465 aaKnown RBP2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms