RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	SSN8	P47821	323 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	ASN2	P49090	572 aa	Known RBP	4.93	□□□□□ -1.62
PAL1	YDR348C	MND1	P53102	219 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	TAM41	P53230	385 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	SNF12	P53628	566 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	YNR065C	P53751	1116 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	YAF9	P53930	226 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	ECM9	Q02202	377 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	YPL107W	Q02873	248 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	INA17	Q02888	182 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	YPL034W	Q03083	165 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	NGL2	Q03264	515 aa	Known RBP	4.93	□□□□□ -1.62
PAL1	YDR348C	PFA5	Q03289	374 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	APC4	Q04601	652 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	MLC2	Q06580	163 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	THI72	Q08579	599 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	ESA1	Q08649	445 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	WRS1	Q12109	432 aa	Known RBP	4.93	□□□□□ -1.62
PAL1	YDR348C	NSL1	Q12143	216 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	YPR1	Q12458	312 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	ENT1	Q12518	454 aa		4.93	□□□□□ -1.62
PAL1	YDR348C	WHI2	P12611	486 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ENA1	P13587	1091 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ABF1	P14164	731 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	DBP3	P20447	523 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	HXT2	P23585	541 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
PAL1	YDR348C	GIT1	P25346	518 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	CHA1	P25379	360 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	YCR015C	P25616	317 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	PRP21	P32524	280 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	IST2	P38250	946 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	PCM1	P38628	557 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	LEU5	P38702	357 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	RIM4	P38741	713 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	FHL1	P39521	936 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	PES4	P39684	611 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	PHM8	P40025	321 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	UTP18	P40362	594 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	YKE4	P40544	346 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	KEL2	P50090	882 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	AIF1	P52923	378 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	CLD1	P53264	445 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	VPS9	P54787	451 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ENA2	Q01896	1091 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	TRS130	Q03660	1102 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	YMR155W	Q03795	547 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ENT2	Q05785	613 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	YPS7	Q06325	596 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	HRK1	Q08732	759 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	PSF3	Q12146	194 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ACF2	Q12168	779 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	YOR214C	Q12282	236 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	SNU23	Q12368	194 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	ENA5	Q12691	1091 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	HKR1	P41809	1802 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	GLN4	P13188	809 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
PAL1	YDR348C	RPB4	P20433	221 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	KIN3	P22209	435 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ERG6	P25087	383 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	SPT14	P32363	452 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	UBP11	P36026	717 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ATP3	P38077	311 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	YRO2	P38079	344 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	YBL029W	P38201	376 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	APN2	P38207	520 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	SRP72	P38688	640 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	STP2	P38704	541 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	OTU2	P38747	307 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	IPI1	P38803	334 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	CRP1	P38845	465 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	FAD1	P38913	306 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	SOP4	P39543	234 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	YER186C	P40101	306 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	MDV1	P47025	714 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	IML2	P47031	731 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	CCT8	P47079	568 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	LYS4	P49367	693 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	HSH155	P49955	971 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	STB4	P50104	949 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	COG1	P53079	417 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	BUD32	P53323	261 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	SOK2	P53438	785 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	CPR8	P53728	308 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	SNU56	Q03782	492 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	TRM12	Q04235	462 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	WHI4	Q07655	649 aa	Known RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	YNG1	Q08465	219 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	SMF3	Q12078	473 aa	Predicted RBP	4.92	□□□□□ -1.62
PAL1	YDR348C	YDR061W	Q12298	539 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	TRM10	Q12400	293 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	ECM3	Q99252	613 aa		4.92	□□□□□ -1.62
PAL1	YDR348C	GAL3	P13045	520 aa		4.91	□□□□□ -1.62
PAL1	YDR348C	CAP2	P13517	287 aa		4.91	□□□□□ -1.62
PAL1	YDR348C	PRE9	P23638	258 aa	Known RBP	4.91	□□□□□ -1.62
PAL1	YDR348C	ATG22	P25568	528 aa		4.91	□□□□□ -1.62
PAL1	YDR348C	GID7	P25569	745 aa		4.91	□□□□□ -1.62
PAL1	YDR348C	PPZ1	P26570	692 aa		4.91	□□□□□ -1.62
PAL1	YDR348C	APE2	P32454	952 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms