RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	ATP11	P32453	318 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	SLX5	P32828	619 aa	Known RBP	7.11	□□□□□ -1.27
SKP1	YDR328C	SDH3	P33421	198 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	PTC1	P35182	281 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	RMA1	P36001	430 aa	Known RBP	7.11	□□□□□ -1.27
SKP1	YDR328C	HXT5	P38695	592 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	DMA1	P38823	416 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	YJL070C	P40361	888 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	CCT7	P42943	550 aa	Known RBP	7.11	□□□□□ -1.27
SKP1	YDR328C	BIR1	P47134	954 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	NAS6	P50086	228 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	MIG2	P53035	382 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	YGR015C	P53208	328 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	NNF2	P53253	936 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	NIS1	P53939	407 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	REX2	P54964	269 aa	Known RBP	7.11	□□□□□ -1.27
SKP1	YDR328C	VHS1	Q03785	461 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	YET2	Q04210	160 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	YMR111C	Q04461	462 aa	Predicted RBP	7.11	□□□□□ -1.27
SKP1	YDR328C	RAD34	Q06665	692 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	YLR413W	Q06689	675 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	CDA1	Q06702	301 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	PLB3	Q08108	686 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	DIA2	Q08496	732 aa	Predicted RBP	7.11	□□□□□ -1.27
SKP1	YDR328C	YPR202W	Q08993	238 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	SRO7	Q12038	1033 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	CMR1	Q12510	522 aa	Known RBP	7.11	□□□□□ -1.27
SKP1	YDR328C	NHA1	Q99271	985 aa		7.11	□□□□□ -1.27
SKP1	YDR328C	TRP3	P00937	484 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	COS2	P0CX12	379 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	COS3	P0CX13	379 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	POL30	P15873	258 aa	Known RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	PHO91	P27514	894 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	COX13	P32799	129 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	FRE2	P36033	711 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	FZO1	P38297	855 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	FTH1	P38310	465 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	YHL008C	P38750	627 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	PFS1	P38872	237 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	BAT1	P38891	393 aa	Known RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	SPF1	P39986	1215 aa	Known RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	GIM4	P40005	111 aa	Known RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	RLP7	P40693	322 aa	Known RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	IAH1	P41734	238 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	SEC27	P41811	889 aa	Known RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	PFA3	P42836	336 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	COS4	P43542	379 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	YJR149W	P47177	404 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	IMA1	P53051	589 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	MDM34	P53083	459 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	AAT1	Q01802	451 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	ECM9	Q02202	377 aa		7.1	□□□□□ -1.27
SKP1	YDR328C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	7.1	□□□□□ -1.27	not detected
SKP1	YDR328C	SNX3	Q08826	162 aa	Known RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	RRP42	Q12277	265 aa	Predicted RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	HSH49	Q99181	213 aa	Predicted RBP	7.1	□□□□□ -1.27
SKP1	YDR328C	AI3	P03877	415 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	HXK2	P04807	486 aa	Known RBP	7.09	□□□□□ -1.27
SKP1	YDR328C	ARD1	P07347	238 aa	Predicted RBP	7.09	□□□□□ -1.27
SKP1	YDR328C	OCA4	P25366	362 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	DGR2	P32330	852 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	STE14	P32584	239 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	7.09	□□□□□ -1.27	not detected
SKP1	YDR328C	CAF4	P36130	643 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	RRP3	P38712	501 aa	Known RBP	7.09	□□□□□ -1.27
SKP1	YDR328C	YPT35	P38815	214 aa	Known RBP	7.09	□□□□□ -1.27
SKP1	YDR328C	YHR127W	P38833	243 aa	Known RBP	7.09	□□□□□ -1.27
SKP1	YDR328C	GIP4	P39732	760 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	YGL176C	P46945	554 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	YPT32	P51996	222 aa	Known RBP	7.09	□□□□□ -1.27
SKP1	YDR328C	SDH1	Q00711	640 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	YMR034C	Q05131	434 aa	Predicted RBP	7.09	□□□□□ -1.27
SKP1	YDR328C	UAF30	Q08747	228 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	YIG1	Q08956	461 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	MHT1	Q12525	324 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	SAS5	Q99314	248 aa		7.09	□□□□□ -1.27
SKP1	YDR328C	MSB2	P32334	1306 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	PWP1	P21304	576 aa	Known RBP	7.08	□□□□□ -1.28
SKP1	YDR328C	PHO87	P25360	923 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	SSE1	P32589	693 aa	Known RBP	7.08	□□□□□ -1.28
SKP1	YDR328C	SRX1	P36077	127 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	MRPL37	P36532	105 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	YBL029W	P38201	376 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	GIC1	P38785	314 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	YFR020W	P43600	232 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	PTR3	P43606	678 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	YJR030C	P47101	745 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	GCV1	P48015	400 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	YGR053C	P53234	283 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	MPS1	P54199	764 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	PRP38	Q00723	242 aa	Predicted RBP	7.08	□□□□□ -1.28
SKP1	YDR328C	ROT1	Q03691	256 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	YDR124W	Q04608	324 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	MCH5	Q08777	521 aa		7.08	□□□□□ -1.28
SKP1	YDR328C	HTA2	P04912	132 aa		7.07	□□□□□ -1.28
SKP1	YDR328C	SCL1	P21243	252 aa	Known RBP	7.07	□□□□□ -1.28
SKP1	YDR328C	SIS1	P25294	352 aa	Known RBP	7.07	□□□□□ -1.28
SKP1	YDR328C	DEF1	P35732	738 aa	Known RBP	7.07	□□□□□ -1.28
SKP1	YDR328C	BMT2	P38278	337 aa		7.07	□□□□□ -1.28
SKP1	YDR328C	INM1	P38710	295 aa		7.07	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms